Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX4Q9UIU6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX4Q9UIU6 INTS4P1-201ENST00000438455 1935 ntBASIC19.15■□□□□ 0.66
SIX4Q9UIU6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.15■□□□□ 0.66
SIX4Q9UIU6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
SIX4Q9UIU6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX4Q9UIU6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX4Q9UIU6 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.15■□□□□ 0.66
SIX4Q9UIU6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.15■□□□□ 0.66
SIX4Q9UIU6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX4Q9UIU6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX4Q9UIU6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
SIX4Q9UIU6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SIX4Q9UIU6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.14■□□□□ 0.66
SIX4Q9UIU6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SIX4Q9UIU6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
SIX4Q9UIU6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SIX4Q9UIU6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 AL450487.1-201ENST00000426799 995 ntBASIC19.14■□□□□ 0.65
SIX4Q9UIU6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 KRT16P4-201ENST00000453883 522 ntBASIC19.14■□□□□ 0.65
SIX4Q9UIU6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 MIR5100-201ENST00000579544 119 ntBASIC19.14■□□□□ 0.65
SIX4Q9UIU6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SIX4Q9UIU6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 AC091304.2-201ENST00000564639 760 ntBASIC19.13■□□□□ 0.65
SIX4Q9UIU6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 AL121772.3-201ENST00000610840 674 ntBASIC19.13■□□□□ 0.65
SIX4Q9UIU6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 AC008764.6-201ENST00000595909 2069 ntBASIC19.13■□□□□ 0.65
SIX4Q9UIU6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SIX4Q9UIU6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SIX4Q9UIU6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms