Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 AC009078.2-202ENST00000463353 338 ntBASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 AP002469.2-201ENST00000531724 424 ntBASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 AC097374.2-201ENST00000618617 1306 ntBASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPNE7Q9UBL6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 KRT8P47-201ENST00000604727 1398 ntBASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPNE7Q9UBL6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 AC096633.1-201ENST00000422446 749 ntBASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 AC008608.2-201ENST00000606089 416 ntBASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms