Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.45■□□□□ 0.86
HOXC10Q9NYD6 RNA5SP416-201ENST00000516838 111 ntBASIC20.45■□□□□ 0.86
HOXC10Q9NYD6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.45■□□□□ 0.86
HOXC10Q9NYD6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.45■□□□□ 0.86
HOXC10Q9NYD6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.45■□□□□ 0.86
HOXC10Q9NYD6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.45■□□□□ 0.86
HOXC10Q9NYD6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.45■□□□□ 0.86
HOXC10Q9NYD6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.45■□□□□ 0.86
HOXC10Q9NYD6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.45■□□□□ 0.86
HOXC10Q9NYD6 AL589182.2-201ENST00000619332 1049 ntBASIC20.45■□□□□ 0.86
HOXC10Q9NYD6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC10Q9NYD6 AC005593.1-201ENST00000624894 515 ntBASIC20.45■□□□□ 0.86
HOXC10Q9NYD6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.45■□□□□ 0.86
HOXC10Q9NYD6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HOXC10Q9NYD6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC10Q9NYD6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 AC073621.1-201ENST00000392730 636 ntBASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 AL020989.1-201ENST00000422979 469 ntBASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 AC092183.1-201ENST00000469884 875 ntBASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
HOXC10Q9NYD6 AL353593.2-201ENST00000602529 1483 ntBASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 AL139424.1-201ENST00000607572 797 ntBASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC10Q9NYD6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 AL049757.1-201ENST00000616842 1596 ntBASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 RPSAP43-201ENST00000402237 625 ntBASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 AC136632.2-201ENST00000512891 861 ntBASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 MIR3687-2-201ENST00000577708 61 ntBASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 MIR3687-1-201ENST00000614492 61 ntBASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC10Q9NYD6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 SIRPAP1-201ENST00000448467 1770 ntBASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 SLC25A24-204ENST00000569674 2357 ntBASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 DNAJB3-201ENST00000446806 729 ntBASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC10Q9NYD6 AC055717.3-201ENST00000622967 595 ntBASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms