Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 AC079776.1-201ENST00000401540 1152 ntBASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 PTCHD3P3-201ENST00000403073 906 ntBASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 AC079140.1-201ENST00000508039 487 ntBASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 TMEM261P1-201ENST00000604899 340 ntBASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRFN3Q9BTN0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRFN3Q9BTN0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRFN3Q9BTN0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LRFN3Q9BTN0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRFN3Q9BTN0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 FEM1AP3-201ENST00000403722 1741 ntBASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.76■□□□□ 0.43
LRFN3Q9BTN0 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 AC138969.3-201ENST00000546612 1459 ntBASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 AC138932.2-201ENST00000548268 1459 ntBASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 AC126755.4-201ENST00000549796 1459 ntBASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 AC092580.3-201ENST00000430932 139 ntBASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 AL353593.2-201ENST00000602529 1483 ntBASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRFN3Q9BTN0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 SPDYE7P-202ENST00000420373 878 ntBASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 AC241585.1-201ENST00000433527 519 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms