Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP1Q96SZ6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CDK5RAP1Q96SZ6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDK5RAP1Q96SZ6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CDK5RAP1Q96SZ6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDK5RAP1Q96SZ6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.58■□□□□ 0.57
CDK5RAP1Q96SZ6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDK5RAP1Q96SZ6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDK5RAP1Q96SZ6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDK5RAP1Q96SZ6 KRT8P47-201ENST00000604727 1398 ntBASIC18.58■□□□□ 0.57
CDK5RAP1Q96SZ6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDK5RAP1Q96SZ6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDK5RAP1Q96SZ6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.58■□□□□ 0.57
CDK5RAP1Q96SZ6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
CDK5RAP1Q96SZ6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDK5RAP1Q96SZ6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CDK5RAP1Q96SZ6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.58■□□□□ 0.56
CDK5RAP1Q96SZ6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.58■□□□□ 0.56
CDK5RAP1Q96SZ6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.58■□□□□ 0.56
CDK5RAP1Q96SZ6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.58■□□□□ 0.56
CDK5RAP1Q96SZ6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP1Q96SZ6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP1Q96SZ6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP1Q96SZ6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP1Q96SZ6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP1Q96SZ6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP1Q96SZ6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.58■□□□□ 0.56
CDK5RAP1Q96SZ6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CDK5RAP1Q96SZ6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP1Q96SZ6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.58■□□□□ 0.56
CDK5RAP1Q96SZ6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 AC007967.3-201ENST00000434308 558 ntBASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP1Q96SZ6 REXO1L9P-201ENST00000604264 2108 ntBASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 RBM17P3-201ENST00000417687 1192 ntBASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 EMBP1-201ENST00000458200 901 ntBASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 AC122714.2-201ENST00000502787 707 ntBASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms