Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXRED1Q96CU9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXRED1Q96CU9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.63■□□□□ 0.09
FOXRED1Q96CU9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXRED1Q96CU9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.63■□□□□ 0.09
FOXRED1Q96CU9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
FOXRED1Q96CU9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
FOXRED1Q96CU9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
FOXRED1Q96CU9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXRED1Q96CU9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.63■□□□□ 0.09
FOXRED1Q96CU9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 AC097488.1-201ENST00000507834 756 ntBASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 REXO1L10P-201ENST00000615707 1290 ntBASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 REXO1L12P-201ENST00000622156 912 ntBASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXRED1Q96CU9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 TNRC18P3-201ENST00000441896 2691 ntBASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 LINC01126-201ENST00000623515 1646 ntBASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 AC022898.2-201ENST00000616822 1312 ntBASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXRED1Q96CU9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXRED1Q96CU9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXRED1Q96CU9 AC133963.1-201ENST00000504166 1679 ntBASIC15.6■□□□□ 0.09
FOXRED1Q96CU9 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXRED1Q96CU9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXRED1Q96CU9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXRED1Q96CU9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.6■□□□□ 0.09
FOXRED1Q96CU9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXRED1Q96CU9 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.6■□□□□ 0.09
FOXRED1Q96CU9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXRED1Q96CU9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXRED1Q96CU9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXRED1Q96CU9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXRED1Q96CU9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXRED1Q96CU9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.6■□□□□ 0.09
FOXRED1Q96CU9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
FOXRED1Q96CU9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms