Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 AC093458.2-201ENST00000623150 629 ntBASIC18.39■□□□□ 0.53
SCG3Q8WXD2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 MIR149-201ENST00000384879 89 ntBASIC18.38■□□□□ 0.53
SCG3Q8WXD2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 AC069148.1-201ENST00000608741 768 ntBASIC18.38■□□□□ 0.53
SCG3Q8WXD2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 AC008764.6-201ENST00000595909 2069 ntBASIC18.38■□□□□ 0.53
SCG3Q8WXD2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCG3Q8WXD2 AL163051.1-201ENST00000569214 1512 ntBASIC18.38■□□□□ 0.53
SCG3Q8WXD2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 ESPNP-201ENST00000270691 2015 ntBASIC18.37■□□□□ 0.53
SCG3Q8WXD2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 RASA4DP-201ENST00000460726 1199 ntBASIC18.37■□□□□ 0.53
SCG3Q8WXD2 KRT18P56-201ENST00000507275 550 ntBASIC18.37■□□□□ 0.53
SCG3Q8WXD2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 AC024243.1-201ENST00000609234 778 ntBASIC18.37■□□□□ 0.53
SCG3Q8WXD2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.37■□□□□ 0.53
SCG3Q8WXD2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms