Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CYP2D8P-201ENST00000433633 1490 ntBASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 AC084018.2-201ENST00000613093 2607 ntBASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 MIR564-202ENST00000385049 94 ntBASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 AC007663.1-201ENST00000438948 1240 ntBASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 AC128688.1-201ENST00000487626 519 ntBASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 AC010947.1-201ENST00000623454 693 ntBASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 AC010653.2-201ENST00000623505 997 ntBASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 AL023806.1-201ENST00000603994 1649 ntBASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTN4IP1Q8WWV3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RTN4IP1Q8WWV3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms