Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 KRT8P48-201ENST00000515599 1220 ntBASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF40Q8TER5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ARHGEF40Q8TER5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ARHGEF40Q8TER5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ARHGEF40Q8TER5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
ARHGEF40Q8TER5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
ARHGEF40Q8TER5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ARHGEF40Q8TER5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
ARHGEF40Q8TER5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
ARHGEF40Q8TER5 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC26.33■■□□□ 1.81
ARHGEF40Q8TER5 AC125807.1-201ENST00000483097 614 ntBASIC26.33■■□□□ 1.81
ARHGEF40Q8TER5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC26.33■■□□□ 1.81
ARHGEF40Q8TER5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC26.33■■□□□ 1.81
ARHGEF40Q8TER5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 HNRNPFP1-201ENST00000391730 1133 ntBASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC26.32■■□□□ 1.8
ARHGEF40Q8TER5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 AL512356.2-201ENST00000546955 174 ntBASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 COX11-202ENST00000571584 1108 ntTSL 2 BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 ACTL9-202ENST00000612068 1252 ntBASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 AL390754.1-201ENST00000619088 582 ntBASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF40Q8TER5 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ARHGEF40Q8TER5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ARHGEF40Q8TER5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ARHGEF40Q8TER5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
ARHGEF40Q8TER5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC26.3■■□□□ 1.8
ARHGEF40Q8TER5 COX5BP2-201ENST00000392354 334 ntBASIC26.3■■□□□ 1.8
ARHGEF40Q8TER5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ARHGEF40Q8TER5 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC26.3■■□□□ 1.8
ARHGEF40Q8TER5 LINC02560-201ENST00000596379 459 ntBASIC26.3■■□□□ 1.8
ARHGEF40Q8TER5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ARHGEF40Q8TER5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC26.3■■□□□ 1.8
ARHGEF40Q8TER5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
ARHGEF40Q8TER5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC26.3■■□□□ 1.8
ARHGEF40Q8TER5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC26.3■■□□□ 1.8
ARHGEF40Q8TER5 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ARHGEF40Q8TER5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ARHGEF40Q8TER5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ARHGEF40Q8TER5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
ARHGEF40Q8TER5 RAC2-204ENST00000406508 893 ntTSL 5 BASIC26.29■■□□□ 1.8
ARHGEF40Q8TER5 AC107890.1-201ENST00000422478 521 ntBASIC26.29■■□□□ 1.8
ARHGEF40Q8TER5 AC026120.1-201ENST00000611536 926 ntBASIC26.29■■□□□ 1.8
ARHGEF40Q8TER5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ARHGEF40Q8TER5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ARHGEF40Q8TER5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC26.29■■□□□ 1.8
ARHGEF40Q8TER5 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC26.29■■□□□ 1.8
ARHGEF40Q8TER5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
ARHGEF40Q8TER5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ARHGEF40Q8TER5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ARHGEF40Q8TER5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC26.29■■□□□ 1.8
ARHGEF40Q8TER5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms