Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC23.73■■□□□ 1.39
COL22A1Q8NFW1 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC23.73■■□□□ 1.39
COL22A1Q8NFW1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
COL22A1Q8NFW1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL22A1Q8NFW1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC23.73■■□□□ 1.39
COL22A1Q8NFW1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL22A1Q8NFW1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL22A1Q8NFW1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL22A1Q8NFW1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
COL22A1Q8NFW1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.73■■□□□ 1.39
COL22A1Q8NFW1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.73■■□□□ 1.39
COL22A1Q8NFW1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL22A1Q8NFW1 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC23.73■■□□□ 1.39
COL22A1Q8NFW1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL22A1Q8NFW1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
COL22A1Q8NFW1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL22A1Q8NFW1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL22A1Q8NFW1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL22A1Q8NFW1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
COL22A1Q8NFW1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL22A1Q8NFW1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL22A1Q8NFW1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.72■■□□□ 1.39
COL22A1Q8NFW1 OR8S1-201ENST00000310194 1080 ntBASIC23.72■■□□□ 1.39
COL22A1Q8NFW1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL22A1Q8NFW1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL22A1Q8NFW1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL22A1Q8NFW1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL22A1Q8NFW1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
COL22A1Q8NFW1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.72■■□□□ 1.39
COL22A1Q8NFW1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC23.72■■□□□ 1.39
COL22A1Q8NFW1 AL032819.2-201ENST00000624543 2162 ntBASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 WRB-204ENST00000398753 699 ntTSL 3 BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 KLF2P3-201ENST00000451977 1087 ntBASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 AC026120.1-201ENST00000611536 926 ntBASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 AC018445.3-201ENST00000624177 1945 ntBASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL22A1Q8NFW1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
COL22A1Q8NFW1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
COL22A1Q8NFW1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
COL22A1Q8NFW1 EDF1-203ENST00000371649 790 ntTSL 2 BASIC23.7■■□□□ 1.39
COL22A1Q8NFW1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.39
COL22A1Q8NFW1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC23.7■■□□□ 1.39
COL22A1Q8NFW1 AP005018.1-201ENST00000525475 301 ntBASIC23.7■■□□□ 1.39
COL22A1Q8NFW1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC23.7■■□□□ 1.39
COL22A1Q8NFW1 ACTL9-202ENST00000612068 1252 ntBASIC23.7■■□□□ 1.39
COL22A1Q8NFW1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC23.7■■□□□ 1.39
COL22A1Q8NFW1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
COL22A1Q8NFW1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 AC069335.1-201ENST00000489972 472 ntBASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 AL512356.2-201ENST00000546955 174 ntBASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL22A1Q8NFW1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms