Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 TSSC2-201ENST00000450217 709 ntBASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 IGHV3-41-201ENST00000613121 348 ntBASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 NOC2LP1-202ENST00000452600 2235 ntBASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 RN7SL606P-201ENST00000472779 293 ntBASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 AC068472.1-201ENST00000474589 881 ntBASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC148Q8NFR7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 SLC25A6P5-201ENST00000435663 894 ntBASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 MTCL1P1-201ENST00000446207 792 ntBASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 AC112698.1-201ENST00000510299 916 ntBASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 KRT18P55-202ENST00000578578 1546 ntBASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC148Q8NFR7 AC018470.1-201ENST00000624790 3129 ntBASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 AC124864.1-201ENST00000623408 392 ntBASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC148Q8NFR7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CCDC148Q8NFR7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CCDC148Q8NFR7 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.64■□□□□ 0.9
CCDC148Q8NFR7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC148Q8NFR7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms