Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK4Q8NE63 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK4Q8NE63 ESRRAP1-201ENST00000400596 1257 ntBASIC17.46■□□□□ 0.39
HIPK4Q8NE63 AP002982.1-201ENST00000492365 877 ntBASIC17.46■□□□□ 0.39
HIPK4Q8NE63 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.46■□□□□ 0.39
HIPK4Q8NE63 RN7SL471P-201ENST00000580476 299 ntBASIC17.46■□□□□ 0.39
HIPK4Q8NE63 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK4Q8NE63 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.46■□□□□ 0.39
HIPK4Q8NE63 AL353708.3-201ENST00000610272 989 ntBASIC17.46■□□□□ 0.39
HIPK4Q8NE63 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.46■□□□□ 0.39
HIPK4Q8NE63 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.46■□□□□ 0.39
HIPK4Q8NE63 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HIPK4Q8NE63 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK4Q8NE63 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
HIPK4Q8NE63 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.46■□□□□ 0.39
HIPK4Q8NE63 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK4Q8NE63 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK4Q8NE63 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIPK4Q8NE63 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HIPK4Q8NE63 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.46■□□□□ 0.38
HIPK4Q8NE63 PHGDH-209ENST00000641074 1780 ntBASIC17.45■□□□□ 0.38
HIPK4Q8NE63 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 AC008741.2-201ENST00000612792 3115 ntBASIC17.45■□□□□ 0.38
HIPK4Q8NE63 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.45■□□□□ 0.38
HIPK4Q8NE63 KSR1P1-201ENST00000446298 240 ntBASIC17.45■□□□□ 0.38
HIPK4Q8NE63 AC091390.4-202ENST00000476426 537 ntBASIC17.45■□□□□ 0.38
HIPK4Q8NE63 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 KRT18P6-201ENST00000555540 1265 ntBASIC17.45■□□□□ 0.38
HIPK4Q8NE63 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIPK4Q8NE63 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 AC004951.3-201ENST00000418645 1148 ntBASIC17.44■□□□□ 0.38
HIPK4Q8NE63 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 HTR7P1-201ENST00000538670 1336 ntBASIC17.44■□□□□ 0.38
HIPK4Q8NE63 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIPK4Q8NE63 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms