Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.46■□□□□ 0.23
LSMEM1Q8N8F7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LSMEM1Q8N8F7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.46■□□□□ 0.23
LSMEM1Q8N8F7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
LSMEM1Q8N8F7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.46■□□□□ 0.22
LSMEM1Q8N8F7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.46■□□□□ 0.22
LSMEM1Q8N8F7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
LSMEM1Q8N8F7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.46■□□□□ 0.22
LSMEM1Q8N8F7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 AC073508.3-201ENST00000619697 1419 ntBASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 AL162727.3-201ENST00000635661 2787 ntBASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 AC084018.2-201ENST00000613093 2607 ntBASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 TERF1P1-201ENST00000311003 1181 ntBASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 STARP1-201ENST00000397973 869 ntBASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 AL441883.1-201ENST00000566170 1045 ntBASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 AL391807.1-203ENST00000604392 2365 ntBASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.45■□□□□ 0.22
LSMEM1Q8N8F7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 LINC00602-201ENST00000629776 2065 ntBASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 AL137013.1-201ENST00000432946 1228 ntBASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 AL136038.4-201ENST00000603606 1261 ntBASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 AC079602.3-201ENST00000623931 403 ntBASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
LSMEM1Q8N8F7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.43■□□□□ 0.22
LSMEM1Q8N8F7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LSMEM1Q8N8F7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LSMEM1Q8N8F7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LSMEM1Q8N8F7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.43■□□□□ 0.22
LSMEM1Q8N8F7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LSMEM1Q8N8F7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LSMEM1Q8N8F7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
LSMEM1Q8N8F7 HLA-F-220ENST00000434407 884 ntBASIC16.43■□□□□ 0.22
LSMEM1Q8N8F7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.43■□□□□ 0.22
LSMEM1Q8N8F7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.43■□□□□ 0.22
LSMEM1Q8N8F7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
LSMEM1Q8N8F7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.43■□□□□ 0.22
LSMEM1Q8N8F7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
LSMEM1Q8N8F7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LSMEM1Q8N8F7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LSMEM1Q8N8F7 AC011558.1-201ENST00000623459 338 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 443.7 ms