Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 FAM207BP-201ENST00000447172 505 ntBASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 AC128688.1-201ENST00000487626 519 ntBASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
DEPDC4Q8N2C3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 AC145285.6-201ENST00000604632 637 ntBASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 AC005363.2-201ENST00000618631 242 ntBASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 AC130371.2-201ENST00000619443 611 ntBASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 AC080080.1-201ENST00000625121 2420 ntBASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 PHGDH-209ENST00000641074 1780 ntBASIC16.72■□□□□ 0.27
DEPDC4Q8N2C3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 AC141586.5-201ENST00000624546 2050 ntBASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 AL390955.1-201ENST00000428694 934 ntBASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.71■□□□□ 0.27
DEPDC4Q8N2C3 AC011506.1-201ENST00000474329 610 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms