Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 AC018695.7-201ENST00000624587 2492 ntBASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 MST1L-201ENST00000442552 2185 ntBASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 LINC00304-203ENST00000565008 1864 ntBASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 AP003041.3-201ENST00000527151 707 ntBASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 AL355312.1-201ENST00000407115 2176 ntBASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01561Q8N1V8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 AC016396.2-201ENST00000562575 1417 ntBASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 ABHD17AP1-201ENST00000358206 933 ntBASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 AC012618.2-201ENST00000428058 849 ntBASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 AC010653.2-201ENST00000623505 997 ntBASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01561Q8N1V8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01561Q8N1V8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms