Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP1BQ7LBR1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 AC112777.1-201ENST00000540175 1423 ntBASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 AC005332.1-201ENST00000577698 1310 ntBASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 AC092597.1-201ENST00000487352 616 ntBASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP1BQ7LBR1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 AL645929.1-201ENST00000420084 975 ntBASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 AC083849.1-201ENST00000615227 514 ntBASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 AL391807.1-203ENST00000604392 2365 ntBASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP1BQ7LBR1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms