Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 AC022211.2-201ENST00000585075 2527 ntBASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 AP001094.4-201ENST00000579008 2176 ntBASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 CA15P1-201ENST00000481698 905 ntBASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 Z99916.2-201ENST00000604037 246 ntBASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 AP001412.1-201ENST00000608405 714 ntBASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTCHD4Q6ZW05 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 AL355355.2-201ENST00000442321 338 ntBASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 AC026471.5-201ENST00000615068 467 ntBASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD4Q6ZW05 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTCHD4Q6ZW05 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.52■□□□□ 0.23
PTCHD4Q6ZW05 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
PTCHD4Q6ZW05 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTCHD4Q6ZW05 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTCHD4Q6ZW05 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTCHD4Q6ZW05 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTCHD4Q6ZW05 SDHAP2-201ENST00000455183 2001 ntBASIC16.52■□□□□ 0.23
PTCHD4Q6ZW05 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms