Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 AL137060.1-201ENST00000618151 2648 ntBASIC15.45■□□□□ 0.06
LRRK2Q5S007 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRK2Q5S007 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 AC112191.1-201ENST00000523689 701 ntBASIC15.45■□□□□ 0.06
LRRK2Q5S007 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRK2Q5S007 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRK2Q5S007 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRK2Q5S007 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRK2Q5S007 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRK2Q5S007 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 AC099522.2-201ENST00000607001 744 ntBASIC15.44■□□□□ 0.06
LRRK2Q5S007 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRK2Q5S007 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRK2Q5S007 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRK2Q5S007 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRK2Q5S007 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRK2Q5S007 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRK2Q5S007 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRK2Q5S007 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRK2Q5S007 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRK2Q5S007 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 ACA64.2-201ENST00000459014 129 ntBASIC15.44■□□□□ 0.06
LRRK2Q5S007 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 AC004706.3-202ENST00000621574 984 ntBASIC15.44■□□□□ 0.06
LRRK2Q5S007 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 AC092919.2-201ENST00000623631 1645 ntBASIC15.44■□□□□ 0.06
LRRK2Q5S007 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRK2Q5S007 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRK2Q5S007 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRK2Q5S007 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRK2Q5S007 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRK2Q5S007 AC084346.2-201ENST00000607097 949 ntBASIC15.43■□□□□ 0.06
LRRK2Q5S007 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRK2Q5S007 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 AL158211.5-201ENST00000623583 2518 ntBASIC15.43■□□□□ 0.06
LRRK2Q5S007 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRK2Q5S007 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRK2Q5S007 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRK2Q5S007 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRK2Q5S007 U91328.1-201ENST00000437528 223 ntBASIC15.43■□□□□ 0.06
LRRK2Q5S007 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRK2Q5S007 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.43■□□□□ 0.06
LRRK2Q5S007 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRK2Q5S007 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRK2Q5S007 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.42■□□□□ 0.06
LRRK2Q5S007 AC132938.5-201ENST00000624980 1813 ntBASIC15.42■□□□□ 0.06
LRRK2Q5S007 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRK2Q5S007 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRK2Q5S007 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRK2Q5S007 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
LRRK2Q5S007 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRK2Q5S007 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRK2Q5S007 AL592309.1-201ENST00000443127 649 ntBASIC15.42■□□□□ 0.06
LRRK2Q5S007 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRK2Q5S007 RPS15P9-201ENST00000494093 319 ntBASIC15.42■□□□□ 0.06
LRRK2Q5S007 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRK2Q5S007 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRK2Q5S007 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRK2Q5S007 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRK2Q5S007 AC132938.6-201ENST00000623828 1655 ntBASIC15.42■□□□□ 0.06
LRRK2Q5S007 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRK2Q5S007 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRK2Q5S007 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms