Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 IRX1P1-201ENST00000438849 1838 ntBASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 KRT18P41-201ENST00000518924 1277 ntBASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 AC008735.5-201ENST00000623544 497 ntBASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 BICD1-207ENST00000551848 1962 ntBASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CTC1Q2NKJ3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CTC1Q2NKJ3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 AC090164.3-201ENST00000610780 2143 ntBASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTC1Q2NKJ3 NOC2LP2-201ENST00000407594 1944 ntBASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 AL356309.3-201ENST00000624132 1934 ntBASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 NOC2LP1-202ENST00000452600 2235 ntBASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 AC008687.5-201ENST00000593746 558 ntBASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 AC020916.1-201ENST00000587762 1774 ntBASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 AL354751.1-201ENST00000412768 1863 ntBASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTC1Q2NKJ3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 WIZP1-201ENST00000531444 2299 ntBASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms