Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 AL022342.1-201ENST00000400363 863 ntBASIC21.65■■□□□ 1.06
RFX7Q2KHR2 POM121L3P-201ENST00000419331 1163 ntBASIC21.65■■□□□ 1.06
RFX7Q2KHR2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 DDX43P3-201ENST00000441064 443 ntBASIC21.65■■□□□ 1.06
RFX7Q2KHR2 MTCL1P1-201ENST00000446207 792 ntBASIC21.65■■□□□ 1.06
RFX7Q2KHR2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 MINOS1P3-201ENST00000457048 203 ntBASIC21.65■■□□□ 1.06
RFX7Q2KHR2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RFX7Q2KHR2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RFX7Q2KHR2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.64■■□□□ 1.06
RFX7Q2KHR2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.06
RFX7Q2KHR2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RFX7Q2KHR2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RFX7Q2KHR2 AL662844.1-201ENST00000546340 181 ntBASIC21.64■■□□□ 1.06
RFX7Q2KHR2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.64■■□□□ 1.06
RFX7Q2KHR2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.64■■□□□ 1.06
RFX7Q2KHR2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RFX7Q2KHR2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RFX7Q2KHR2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RFX7Q2KHR2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.64■■□□□ 1.05
RFX7Q2KHR2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.64■■□□□ 1.05
RFX7Q2KHR2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.64■■□□□ 1.05
RFX7Q2KHR2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.64■■□□□ 1.05
RFX7Q2KHR2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFX7Q2KHR2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFX7Q2KHR2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.64■■□□□ 1.05
RFX7Q2KHR2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.64■■□□□ 1.05
RFX7Q2KHR2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
RFX7Q2KHR2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 AL671883.3-201ENST00000603274 991 ntBASIC21.63■■□□□ 1.05
RFX7Q2KHR2 AL138831.2-201ENST00000606564 490 ntBASIC21.63■■□□□ 1.05
RFX7Q2KHR2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.63■■□□□ 1.05
RFX7Q2KHR2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RFX7Q2KHR2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms