Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL1Q00532 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDKL1Q00532 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL1Q00532 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL1Q00532 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.66■□□□□ 0.42
CDKL1Q00532 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDKL1Q00532 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL1Q00532 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.66■□□□□ 0.42
CDKL1Q00532 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL1Q00532 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.66■□□□□ 0.42
CDKL1Q00532 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL1Q00532 AC005521.1-201ENST00000393351 872 ntBASIC17.66■□□□□ 0.42
CDKL1Q00532 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL1Q00532 AC211429.1-201ENST00000415277 523 ntBASIC17.66■□□□□ 0.42
CDKL1Q00532 YBX1P2-201ENST00000489612 999 ntBASIC17.66■□□□□ 0.42
CDKL1Q00532 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.66■□□□□ 0.42
CDKL1Q00532 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.66■□□□□ 0.42
CDKL1Q00532 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.66■□□□□ 0.42
CDKL1Q00532 AC132938.6-201ENST00000623828 1655 ntBASIC17.66■□□□□ 0.42
CDKL1Q00532 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL1Q00532 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDKL1Q00532 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.66■□□□□ 0.42
CDKL1Q00532 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL1Q00532 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKL1Q00532 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.66■□□□□ 0.42
CDKL1Q00532 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CDKL1Q00532 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL1Q00532 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDKL1Q00532 LINC00167-201ENST00000530583 1419 ntBASIC17.65■□□□□ 0.42
CDKL1Q00532 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL1Q00532 AL391807.1-203ENST00000604392 2365 ntBASIC17.65■□□□□ 0.42
CDKL1Q00532 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDKL1Q00532 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.65■□□□□ 0.42
CDKL1Q00532 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CDKL1Q00532 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CDKL1Q00532 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDKL1Q00532 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.65■□□□□ 0.42
CDKL1Q00532 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL1Q00532 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDKL1Q00532 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDKL1Q00532 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CDKL1Q00532 AC117947.1-201ENST00000427448 529 ntBASIC17.65■□□□□ 0.42
CDKL1Q00532 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.65■□□□□ 0.42
CDKL1Q00532 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL1Q00532 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.65■□□□□ 0.42
CDKL1Q00532 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL1Q00532 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.65■□□□□ 0.42
CDKL1Q00532 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.65■□□□□ 0.42
CDKL1Q00532 AC024563.2-201ENST00000603282 481 ntBASIC17.65■□□□□ 0.42
CDKL1Q00532 AL136038.4-201ENST00000603606 1261 ntBASIC17.65■□□□□ 0.42
CDKL1Q00532 AC139887.4-201ENST00000607877 719 ntBASIC17.65■□□□□ 0.42
CDKL1Q00532 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL1Q00532 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL1Q00532 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CDKL1Q00532 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL1Q00532 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL1Q00532 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL1Q00532 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.65■□□□□ 0.42
CDKL1Q00532 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.65■□□□□ 0.42
CDKL1Q00532 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL1Q00532 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL1Q00532 AC141586.5-201ENST00000624546 2050 ntBASIC17.65■□□□□ 0.42
CDKL1Q00532 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL1Q00532 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL1Q00532 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDKL1Q00532 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDKL1Q00532 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CDKL1Q00532 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
CDKL1Q00532 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL1Q00532 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL1Q00532 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CDKL1Q00532 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKL1Q00532 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL1Q00532 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CDKL1Q00532 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL1Q00532 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL1Q00532 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
CDKL1Q00532 HLA-F-220ENST00000434407 884 ntBASIC17.64■□□□□ 0.41
CDKL1Q00532 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.64■□□□□ 0.41
CDKL1Q00532 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL1Q00532 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
CDKL1Q00532 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.64■□□□□ 0.41
CDKL1Q00532 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKL1Q00532 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CDKL1Q00532 AC079602.3-201ENST00000623931 403 ntBASIC17.64■□□□□ 0.41
CDKL1Q00532 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL1Q00532 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL1Q00532 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.64■□□□□ 0.41
CDKL1Q00532 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
CDKL1Q00532 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL1Q00532 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL1Q00532 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CDKL1Q00532 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL1Q00532 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL1Q00532 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL1Q00532 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL1Q00532 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL1Q00532 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.63■□□□□ 0.41
CDKL1Q00532 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL1Q00532 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms