Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.82■□□□□ 0.44
NUBP1P53384 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NUBP1P53384 AC009093.7-201ENST00000623853 1223 ntBASIC17.82■□□□□ 0.44
NUBP1P53384 AL805961.1-202ENST00000641562 540 ntBASIC17.82■□□□□ 0.44
NUBP1P53384 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.82■□□□□ 0.44
NUBP1P53384 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUBP1P53384 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NUBP1P53384 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUBP1P53384 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.82■□□□□ 0.44
NUBP1P53384 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUBP1P53384 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUBP1P53384 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUBP1P53384 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUBP1P53384 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUBP1P53384 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.81■□□□□ 0.44
NUBP1P53384 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUBP1P53384 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUBP1P53384 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUBP1P53384 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.81■□□□□ 0.44
NUBP1P53384 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NUBP1P53384 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.81■□□□□ 0.44
NUBP1P53384 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NUBP1P53384 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NUBP1P53384 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUBP1P53384 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.81■□□□□ 0.44
NUBP1P53384 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.81■□□□□ 0.44
NUBP1P53384 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NUBP1P53384 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.81■□□□□ 0.44
NUBP1P53384 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.81■□□□□ 0.44
NUBP1P53384 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
NUBP1P53384 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.81■□□□□ 0.44
NUBP1P53384 MTND2P15-201ENST00000418575 892 ntBASIC17.81■□□□□ 0.44
NUBP1P53384 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.81■□□□□ 0.44
NUBP1P53384 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.81■□□□□ 0.44
NUBP1P53384 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.81■□□□□ 0.44
NUBP1P53384 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.81■□□□□ 0.44
NUBP1P53384 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.81■□□□□ 0.44
NUBP1P53384 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.81■□□□□ 0.44
NUBP1P53384 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.81■□□□□ 0.44
NUBP1P53384 AC020658.4-201ENST00000613987 684 ntBASIC17.81■□□□□ 0.44
NUBP1P53384 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.81■□□□□ 0.44
NUBP1P53384 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUBP1P53384 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.81■□□□□ 0.44
NUBP1P53384 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.81■□□□□ 0.44
NUBP1P53384 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUBP1P53384 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NUBP1P53384 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUBP1P53384 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUBP1P53384 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUBP1P53384 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUBP1P53384 AL391422.3-201ENST00000603791 2761 ntBASIC17.8■□□□□ 0.44
NUBP1P53384 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.8■□□□□ 0.44
NUBP1P53384 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUBP1P53384 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUBP1P53384 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.8■□□□□ 0.44
NUBP1P53384 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUBP1P53384 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NUBP1P53384 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NUBP1P53384 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.8■□□□□ 0.44
NUBP1P53384 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NUBP1P53384 AP002414.1-201ENST00000391405 1147 ntBASIC17.8■□□□□ 0.44
NUBP1P53384 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NUBP1P53384 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC17.8■□□□□ 0.44
NUBP1P53384 AC096633.1-201ENST00000422446 749 ntBASIC17.8■□□□□ 0.44
NUBP1P53384 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.8■□□□□ 0.44
NUBP1P53384 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC17.8■□□□□ 0.44
NUBP1P53384 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.8■□□□□ 0.44
NUBP1P53384 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC17.8■□□□□ 0.44
NUBP1P53384 AC063950.1-202ENST00000600133 568 ntBASIC17.8■□□□□ 0.44
NUBP1P53384 AC017076.1-201ENST00000607613 578 ntBASIC17.8■□□□□ 0.44
NUBP1P53384 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.8■□□□□ 0.44
NUBP1P53384 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUBP1P53384 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUBP1P53384 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NUBP1P53384 AC025580.3-201ENST00000617932 1424 ntBASIC17.8■□□□□ 0.44
NUBP1P53384 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUBP1P53384 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.79■□□□□ 0.44
NUBP1P53384 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.79■□□□□ 0.44
NUBP1P53384 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUBP1P53384 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUBP1P53384 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUBP1P53384 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.79■□□□□ 0.44
NUBP1P53384 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
NUBP1P53384 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.79■□□□□ 0.44
NUBP1P53384 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUBP1P53384 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUBP1P53384 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.79■□□□□ 0.44
NUBP1P53384 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.79■□□□□ 0.44
NUBP1P53384 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.79■□□□□ 0.44
NUBP1P53384 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.79■□□□□ 0.44
NUBP1P53384 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.79■□□□□ 0.44
NUBP1P53384 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUBP1P53384 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUBP1P53384 AL512356.2-201ENST00000546955 174 ntBASIC17.79■□□□□ 0.44
NUBP1P53384 DUX4L27-201ENST00000554796 1261 ntBASIC17.79■□□□□ 0.44
NUBP1P53384 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.79■□□□□ 0.44
NUBP1P53384 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
NUBP1P53384 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.79■□□□□ 0.44
NUBP1P53384 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NUBP1P53384 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms