Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASP4P49662 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASP4P49662 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASP4P49662 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.57■□□□□ 0.72
CASP4P49662 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.57■□□□□ 0.72
CASP4P49662 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASP4P49662 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CASP4P49662 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.57■□□□□ 0.72
CASP4P49662 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CASP4P49662 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CASP4P49662 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 AC009949.1-201ENST00000623048 1830 ntBASIC19.56■□□□□ 0.72
CASP4P49662 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CASP4P49662 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.56■□□□□ 0.72
CASP4P49662 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.56■□□□□ 0.72
CASP4P49662 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.56■□□□□ 0.72
CASP4P49662 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CASP4P49662 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.56■□□□□ 0.72
CASP4P49662 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.56■□□□□ 0.72
CASP4P49662 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
CASP4P49662 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.56■□□□□ 0.72
CASP4P49662 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CASP4P49662 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CASP4P49662 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CASP4P49662 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.56■□□□□ 0.72
CASP4P49662 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CASP4P49662 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CASP4P49662 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.55■□□□□ 0.72
CASP4P49662 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CASP4P49662 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.55■□□□□ 0.72
CASP4P49662 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASP4P49662 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASP4P49662 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CASP4P49662 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASP4P49662 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASP4P49662 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CASP4P49662 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CASP4P49662 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.55■□□□□ 0.72
CASP4P49662 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CASP4P49662 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CASP4P49662 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.55■□□□□ 0.72
CASP4P49662 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASP4P49662 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.55■□□□□ 0.72
CASP4P49662 AC112698.1-201ENST00000510299 916 ntBASIC19.55■□□□□ 0.72
CASP4P49662 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.55■□□□□ 0.72
CASP4P49662 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.55■□□□□ 0.72
CASP4P49662 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.55■□□□□ 0.72
CASP4P49662 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CASP4P49662 AC116407.4-201ENST00000623319 1061 ntBASIC19.55■□□□□ 0.72
CASP4P49662 AL358472.4-201ENST00000633140 710 ntBASIC19.55■□□□□ 0.72
CASP4P49662 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.55■□□□□ 0.72
CASP4P49662 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASP4P49662 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CASP4P49662 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CASP4P49662 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CASP4P49662 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CASP4P49662 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASP4P49662 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.54■□□□□ 0.72
CASP4P49662 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASP4P49662 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.54■□□□□ 0.72
CASP4P49662 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASP4P49662 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.54■□□□□ 0.72
CASP4P49662 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASP4P49662 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.54■□□□□ 0.72
CASP4P49662 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CASP4P49662 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.54■□□□□ 0.72
CASP4P49662 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASP4P49662 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASP4P49662 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CASP4P49662 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASP4P49662 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CASP4P49662 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASP4P49662 TSPY22P-201ENST00000427496 604 ntBASIC19.54■□□□□ 0.72
CASP4P49662 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CASP4P49662 MTCL1P1-201ENST00000446207 792 ntBASIC19.54■□□□□ 0.72
CASP4P49662 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.54■□□□□ 0.72
CASP4P49662 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.54■□□□□ 0.72
CASP4P49662 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CASP4P49662 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CASP4P49662 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
CASP4P49662 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASP4P49662 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CASP4P49662 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms