Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CR1P49238 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.8■□□□□ 0.12
CX3CR1P49238 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.8■□□□□ 0.12
CX3CR1P49238 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CX3CR1P49238 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
CX3CR1P49238 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CR1P49238 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CX3CR1P49238 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CX3CR1P49238 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CX3CR1P49238 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CX3CR1P49238 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.8■□□□□ 0.12
CX3CR1P49238 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CR1P49238 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CX3CR1P49238 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CR1P49238 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.8■□□□□ 0.12
CX3CR1P49238 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.8■□□□□ 0.12
CX3CR1P49238 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.79■□□□□ 0.12
CX3CR1P49238 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.79■□□□□ 0.12
CX3CR1P49238 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CX3CR1P49238 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.79■□□□□ 0.12
CX3CR1P49238 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.79■□□□□ 0.12
CX3CR1P49238 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.79■□□□□ 0.12
CX3CR1P49238 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.79■□□□□ 0.12
CX3CR1P49238 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.79■□□□□ 0.12
CX3CR1P49238 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.79■□□□□ 0.12
CX3CR1P49238 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CX3CR1P49238 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CX3CR1P49238 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CX3CR1P49238 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.78■□□□□ 0.12
CX3CR1P49238 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.78■□□□□ 0.12
CX3CR1P49238 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 PVRIG2P-201ENST00000435460 978 ntBASIC15.78■□□□□ 0.12
CX3CR1P49238 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.78■□□□□ 0.12
CX3CR1P49238 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.78■□□□□ 0.12
CX3CR1P49238 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.78■□□□□ 0.12
CX3CR1P49238 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.78■□□□□ 0.12
CX3CR1P49238 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.78■□□□□ 0.12
CX3CR1P49238 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 AC132938.6-201ENST00000623828 1655 ntBASIC15.78■□□□□ 0.12
CX3CR1P49238 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.78■□□□□ 0.12
CX3CR1P49238 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CX3CR1P49238 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CX3CR1P49238 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CX3CR1P49238 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CX3CR1P49238 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CX3CR1P49238 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CX3CR1P49238 CROCCP1-201ENST00000426910 5675 ntBASIC15.77■□□□□ 0.12
CX3CR1P49238 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CX3CR1P49238 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.77■□□□□ 0.12
CX3CR1P49238 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CX3CR1P49238 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CX3CR1P49238 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CX3CR1P49238 LIN28AP1-201ENST00000429574 405 ntBASIC15.77■□□□□ 0.12
CX3CR1P49238 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.77■□□□□ 0.12
CX3CR1P49238 AC034232.1-201ENST00000506026 1064 ntBASIC15.77■□□□□ 0.12
CX3CR1P49238 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CX3CR1P49238 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.77■□□□□ 0.12
CX3CR1P49238 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CX3CR1P49238 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.77■□□□□ 0.12
CX3CR1P49238 GCSHP2-201ENST00000560971 527 ntBASIC15.77■□□□□ 0.12
CX3CR1P49238 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms