Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRNA4P43681 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
CHRNA4P43681 AL590326.2-201ENST00000625139 305 ntBASIC18.11■□□□□ 0.49
CHRNA4P43681 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
CHRNA4P43681 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHRNA4P43681 KRT8P47-201ENST00000604727 1398 ntBASIC18.11■□□□□ 0.49
CHRNA4P43681 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA4P43681 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA4P43681 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA4P43681 GNAS-203ENST00000306120 1878 ntBASIC18.11■□□□□ 0.49
CHRNA4P43681 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA4P43681 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRNA4P43681 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA4P43681 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA4P43681 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.11■□□□□ 0.49
CHRNA4P43681 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA4P43681 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA4P43681 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.11■□□□□ 0.49
CHRNA4P43681 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA4P43681 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHRNA4P43681 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNA4P43681 AC138932.1-201ENST00000534164 6830 ntBASIC18.11■□□□□ 0.49
CHRNA4P43681 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA4P43681 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA4P43681 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA4P43681 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHRNA4P43681 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNA4P43681 AC005332.1-201ENST00000577698 1310 ntBASIC18.1■□□□□ 0.49
CHRNA4P43681 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHRNA4P43681 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA4P43681 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNA4P43681 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNA4P43681 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.1■□□□□ 0.49
CHRNA4P43681 AC087388.1-201ENST00000571370 1112 ntBASIC18.1■□□□□ 0.49
CHRNA4P43681 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.1■□□□□ 0.49
CHRNA4P43681 AC009154.2-201ENST00000621177 724 ntBASIC18.1■□□□□ 0.49
CHRNA4P43681 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA4P43681 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA4P43681 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CHRNA4P43681 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNA4P43681 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA4P43681 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNA4P43681 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHRNA4P43681 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA4P43681 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA4P43681 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA4P43681 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNA4P43681 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA4P43681 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA4P43681 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA4P43681 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.09■□□□□ 0.49
CHRNA4P43681 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA4P43681 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA4P43681 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA4P43681 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CHRNA4P43681 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CHRNA4P43681 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA4P43681 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA4P43681 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA4P43681 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA4P43681 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA4P43681 AC022898.2-201ENST00000616822 1312 ntBASIC18.09■□□□□ 0.49
CHRNA4P43681 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA4P43681 LETM1P2-201ENST00000597330 2178 ntBASIC18.09■□□□□ 0.49
CHRNA4P43681 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA4P43681 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA4P43681 KRT18P35-201ENST00000510488 1269 ntBASIC18.09■□□□□ 0.49
CHRNA4P43681 FAM86EP-206ENST00000510506 987 ntBASIC18.09■□□□□ 0.49
CHRNA4P43681 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.09■□□□□ 0.49
CHRNA4P43681 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.09■□□□□ 0.49
CHRNA4P43681 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.09■□□□□ 0.49
CHRNA4P43681 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.09■□□□□ 0.49
CHRNA4P43681 AC011498.5-201ENST00000592027 486 ntBASIC18.09■□□□□ 0.49
CHRNA4P43681 AL121956.5-201ENST00000625261 221 ntBASIC18.09■□□□□ 0.49
CHRNA4P43681 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
CHRNA4P43681 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA4P43681 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CHRNA4P43681 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CHRNA4P43681 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHRNA4P43681 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA4P43681 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CHRNA4P43681 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA4P43681 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA4P43681 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.08■□□□□ 0.49
CHRNA4P43681 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA4P43681 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA4P43681 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.08■□□□□ 0.49
CHRNA4P43681 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA4P43681 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CHRNA4P43681 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA4P43681 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA4P43681 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA4P43681 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.08■□□□□ 0.49
CHRNA4P43681 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA4P43681 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA4P43681 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA4P43681 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.08■□□□□ 0.48
CHRNA4P43681 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA4P43681 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA4P43681 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms