Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL6A2P12110 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COL6A2P12110 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL6A2P12110 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL6A2P12110 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.74■□□□□ 0.43
COL6A2P12110 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.74■□□□□ 0.43
COL6A2P12110 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.74■□□□□ 0.43
COL6A2P12110 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL6A2P12110 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
COL6A2P12110 HLA-J-201ENST00000462773 1622 ntBASIC17.74■□□□□ 0.43
COL6A2P12110 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL6A2P12110 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.74■□□□□ 0.43
COL6A2P12110 NAPSB-206ENST00000562112 1266 ntBASIC17.74■□□□□ 0.43
COL6A2P12110 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.74■□□□□ 0.43
COL6A2P12110 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL6A2P12110 AC010947.1-201ENST00000623454 693 ntBASIC17.74■□□□□ 0.43
COL6A2P12110 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
COL6A2P12110 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COL6A2P12110 CYP2D8P-201ENST00000433633 1490 ntBASIC17.74■□□□□ 0.43
COL6A2P12110 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.74■□□□□ 0.43
COL6A2P12110 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.74■□□□□ 0.43
COL6A2P12110 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
COL6A2P12110 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.73■□□□□ 0.43
COL6A2P12110 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.73■□□□□ 0.43
COL6A2P12110 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
COL6A2P12110 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.73■□□□□ 0.43
COL6A2P12110 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.73■□□□□ 0.43
COL6A2P12110 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.73■□□□□ 0.43
COL6A2P12110 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.73■□□□□ 0.43
COL6A2P12110 SNORA78-201ENST00000459373 127 ntBASIC17.73■□□□□ 0.43
COL6A2P12110 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.73■□□□□ 0.43
COL6A2P12110 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.73■□□□□ 0.43
COL6A2P12110 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
COL6A2P12110 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.73■□□□□ 0.43
COL6A2P12110 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.73■□□□□ 0.43
COL6A2P12110 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.73■□□□□ 0.43
COL6A2P12110 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.73■□□□□ 0.43
COL6A2P12110 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.73■□□□□ 0.43
COL6A2P12110 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.73■□□□□ 0.43
COL6A2P12110 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.73■□□□□ 0.43
COL6A2P12110 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.73■□□□□ 0.43
COL6A2P12110 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
COL6A2P12110 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.73■□□□□ 0.43
COL6A2P12110 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.73■□□□□ 0.43
COL6A2P12110 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL6A2P12110 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
COL6A2P12110 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
COL6A2P12110 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.73■□□□□ 0.43
COL6A2P12110 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL6A2P12110 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL6A2P12110 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.72■□□□□ 0.43
COL6A2P12110 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL6A2P12110 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
COL6A2P12110 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL6A2P12110 AC124067.4-201ENST00000519691 2379 ntBASIC17.72■□□□□ 0.43
COL6A2P12110 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL6A2P12110 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL6A2P12110 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL6A2P12110 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL6A2P12110 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
COL6A2P12110 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL6A2P12110 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL6A2P12110 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
COL6A2P12110 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.72■□□□□ 0.43
COL6A2P12110 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
COL6A2P12110 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.72■□□□□ 0.43
COL6A2P12110 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.72■□□□□ 0.43
COL6A2P12110 FAM87A-204ENST00000613235 858 ntBASIC17.72■□□□□ 0.43
COL6A2P12110 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL6A2P12110 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL6A2P12110 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL6A2P12110 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
COL6A2P12110 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
COL6A2P12110 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL6A2P12110 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
COL6A2P12110 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL6A2P12110 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.72■□□□□ 0.43
COL6A2P12110 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL6A2P12110 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL6A2P12110 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms