Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 MIR4751-201ENST00000578027 74 ntBASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 AL589182.2-201ENST00000619332 1049 ntBASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 AC092865.6-201ENST00000642101 219 ntBASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 ESPNP-201ENST00000270691 2015 ntBASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CSB-PGBD3P0DP91 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 AC002310.6-201ENST00000624451 1377 ntBASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 ELK2BP-201ENST00000415014 1224 ntBASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 AC018845.2-201ENST00000568326 409 ntBASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
CSB-PGBD3P0DP91 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 AC103564.2-201ENST00000432853 1299 ntBASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 AC004706.3-202ENST00000621574 984 ntBASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 AC006504.4-201ENST00000592118 1568 ntBASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 KRT8P47-201ENST00000604727 1398 ntBASIC23.65■■□□□ 1.38
CSB-PGBD3P0DP91 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CSB-PGBD3P0DP91 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CSB-PGBD3P0DP91 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
CSB-PGBD3P0DP91 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
CSB-PGBD3P0DP91 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CSB-PGBD3P0DP91 AL020989.1-201ENST00000422979 469 ntBASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms