Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 KRT18P22-201ENST00000402024 1347 ntBASIC19.43■□□□□ 0.7
CCDC172P0C7W6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC172P0C7W6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 AC006116.8-202ENST00000587620 1550 ntBASIC19.42■□□□□ 0.7
CCDC172P0C7W6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 PVRIG2P-201ENST00000435460 978 ntBASIC19.42■□□□□ 0.7
CCDC172P0C7W6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 TSPY15P-201ENST00000457163 923 ntBASIC19.42■□□□□ 0.7
CCDC172P0C7W6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 LINC01568-207ENST00000641790 1380 ntBASIC19.42■□□□□ 0.7
CCDC172P0C7W6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC172P0C7W6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 AC009053.2-201ENST00000563701 2365 ntBASIC19.41■□□□□ 0.7
CCDC172P0C7W6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.41■□□□□ 0.7
CCDC172P0C7W6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 ECEL1P3-201ENST00000427961 737 ntBASIC19.41■□□□□ 0.7
CCDC172P0C7W6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC172P0C7W6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 AC034232.1-201ENST00000506026 1064 ntBASIC19.4■□□□□ 0.7
CCDC172P0C7W6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.4■□□□□ 0.7
CCDC172P0C7W6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCDC172P0C7W6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms