Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ALDH1A1P00352 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ALDH1A1P00352 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ALDH1A1P00352 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ALDH1A1P00352 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.35■□□□□ 0.85
ALDH1A1P00352 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALDH1A1P00352 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALDH1A1P00352 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALDH1A1P00352 AC132938.5-201ENST00000624980 1813 ntBASIC20.34■□□□□ 0.85
ALDH1A1P00352 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALDH1A1P00352 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ALDH1A1P00352 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 GK-202ENST00000378941 458 ntTSL 3 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 KLF4P1-201ENST00000412782 1185 ntBASIC20.34■□□□□ 0.85
ALDH1A1P00352 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 AC068137.2-201ENST00000605408 478 ntBASIC20.34■□□□□ 0.85
ALDH1A1P00352 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALDH1A1P00352 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ALDH1A1P00352 AC148477.5-201ENST00000625164 1645 ntBASIC20.34■□□□□ 0.85
ALDH1A1P00352 AL032819.2-201ENST00000624543 2162 ntBASIC20.34■□□□□ 0.85
ALDH1A1P00352 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALDH1A1P00352 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALDH1A1P00352 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ALDH1A1P00352 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ALDH1A1P00352 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALDH1A1P00352 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALDH1A1P00352 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALDH1A1P00352 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ALDH1A1P00352 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.33■□□□□ 0.85
ALDH1A1P00352 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.33■□□□□ 0.85
ALDH1A1P00352 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.33■□□□□ 0.85
ALDH1A1P00352 INGX-202ENST00000489074 768 ntBASIC20.33■□□□□ 0.85
ALDH1A1P00352 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.33■□□□□ 0.85
ALDH1A1P00352 AC087641.1-201ENST00000557561 1021 ntBASIC20.33■□□□□ 0.85
ALDH1A1P00352 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.33■□□□□ 0.85
ALDH1A1P00352 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.33■□□□□ 0.85
ALDH1A1P00352 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.33■□□□□ 0.85
ALDH1A1P00352 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ALDH1A1P00352 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
ALDH1A1P00352 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.33■□□□□ 0.84
ALDH1A1P00352 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ALDH1A1P00352 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ALDH1A1P00352 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ALDH1A1P00352 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ALDH1A1P00352 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ALDH1A1P00352 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ALDH1A1P00352 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ALDH1A1P00352 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ALDH1A1P00352 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
ALDH1A1P00352 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ALDH1A1P00352 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.32■□□□□ 0.84
ALDH1A1P00352 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.32■□□□□ 0.84
ALDH1A1P00352 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ALDH1A1P00352 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.32■□□□□ 0.84
ALDH1A1P00352 AC093520.2-201ENST00000561830 333 ntBASIC20.32■□□□□ 0.84
ALDH1A1P00352 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.32■□□□□ 0.84
ALDH1A1P00352 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.32■□□□□ 0.84
ALDH1A1P00352 AC012645.4-201ENST00000610691 1061 ntBASIC20.32■□□□□ 0.84
ALDH1A1P00352 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.32■□□□□ 0.84
ALDH1A1P00352 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ALDH1A1P00352 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.32■□□□□ 0.84
ALDH1A1P00352 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.32■□□□□ 0.84
ALDH1A1P00352 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ALDH1A1P00352 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.32■□□□□ 0.84
ALDH1A1P00352 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ALDH1A1P00352 AC132938.6-201ENST00000623828 1655 ntBASIC20.32■□□□□ 0.84
ALDH1A1P00352 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ALDH1A1P00352 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.32■□□□□ 0.84
ALDH1A1P00352 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
ALDH1A1P00352 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALDH1A1P00352 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ALDH1A1P00352 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALDH1A1P00352 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ALDH1A1P00352 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALDH1A1P00352 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALDH1A1P00352 AL137060.1-201ENST00000618151 2648 ntBASIC20.31■□□□□ 0.84
ALDH1A1P00352 AL049757.1-201ENST00000616842 1596 ntBASIC20.31■□□□□ 0.84
ALDH1A1P00352 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALDH1A1P00352 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ALDH1A1P00352 PTCHD3P3-201ENST00000403073 906 ntBASIC20.31■□□□□ 0.84
ALDH1A1P00352 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.31■□□□□ 0.84
ALDH1A1P00352 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.31■□□□□ 0.84
ALDH1A1P00352 AC093214.1-201ENST00000511688 1107 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms