Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RAPGEF3O95398 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RAPGEF3O95398 TFAMP1-201ENST00000412727 736 ntBASIC26.7■■□□□ 1.86
RAPGEF3O95398 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
RAPGEF3O95398 AL008721.1-201ENST00000609964 604 ntBASIC26.7■■□□□ 1.86
RAPGEF3O95398 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC26.7■■□□□ 1.86
RAPGEF3O95398 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RAPGEF3O95398 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RAPGEF3O95398 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RAPGEF3O95398 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RAPGEF3O95398 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
RAPGEF3O95398 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
RAPGEF3O95398 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RAPGEF3O95398 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
RAPGEF3O95398 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC26.69■■□□□ 1.86
RAPGEF3O95398 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC26.69■■□□□ 1.86
RAPGEF3O95398 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
RAPGEF3O95398 AC067863.1-201ENST00000494933 530 ntBASIC26.69■■□□□ 1.86
RAPGEF3O95398 VPS29-207ENST00000549970 818 ntTSL 3 BASIC26.69■■□□□ 1.86
RAPGEF3O95398 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC26.69■■□□□ 1.86
RAPGEF3O95398 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC26.69■■□□□ 1.86
RAPGEF3O95398 MED16-214ENST00000617672 554 ntTSL 5 BASIC26.69■■□□□ 1.86
RAPGEF3O95398 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RAPGEF3O95398 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RAPGEF3O95398 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
RAPGEF3O95398 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
RAPGEF3O95398 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC26.68■■□□□ 1.86
RAPGEF3O95398 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC26.68■■□□□ 1.86
RAPGEF3O95398 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RAPGEF3O95398 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
RAPGEF3O95398 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
RAPGEF3O95398 AP002414.1-201ENST00000391405 1147 ntBASIC26.68■■□□□ 1.86
RAPGEF3O95398 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC26.68■■□□□ 1.86
RAPGEF3O95398 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC26.68■■□□□ 1.86
RAPGEF3O95398 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC26.68■■□□□ 1.86
RAPGEF3O95398 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC26.68■■□□□ 1.86
RAPGEF3O95398 AC051619.7-201ENST00000568314 623 ntBASIC26.68■■□□□ 1.86
RAPGEF3O95398 IGHV3OR16-6-201ENST00000568775 360 ntBASIC26.68■■□□□ 1.86
RAPGEF3O95398 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC26.68■■□□□ 1.86
RAPGEF3O95398 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC26.68■■□□□ 1.86
RAPGEF3O95398 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RAPGEF3O95398 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RAPGEF3O95398 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RAPGEF3O95398 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
RAPGEF3O95398 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
RAPGEF3O95398 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
RAPGEF3O95398 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC26.67■■□□□ 1.86
RAPGEF3O95398 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RAPGEF3O95398 HLA-V-201ENST00000429037 534 ntBASIC26.67■■□□□ 1.86
RAPGEF3O95398 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC26.67■■□□□ 1.86
RAPGEF3O95398 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
RAPGEF3O95398 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RAPGEF3O95398 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC26.66■■□□□ 1.86
RAPGEF3O95398 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RAPGEF3O95398 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RAPGEF3O95398 FUT8-AS1-201ENST00000621019 1521 ntBASIC26.66■■□□□ 1.86
RAPGEF3O95398 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
RAPGEF3O95398 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RAPGEF3O95398 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC26.66■■□□□ 1.86
RAPGEF3O95398 KLF4P1-201ENST00000412782 1185 ntBASIC26.66■■□□□ 1.86
RAPGEF3O95398 AP005018.1-201ENST00000525475 301 ntBASIC26.66■■□□□ 1.86
RAPGEF3O95398 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
RAPGEF3O95398 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RAPGEF3O95398 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC26.66■■□□□ 1.86
RAPGEF3O95398 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC26.66■■□□□ 1.86
RAPGEF3O95398 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
RAPGEF3O95398 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC26.66■■□□□ 1.86
RAPGEF3O95398 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
RAPGEF3O95398 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
RAPGEF3O95398 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RAPGEF3O95398 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RAPGEF3O95398 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC26.65■■□□□ 1.86
RAPGEF3O95398 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RAPGEF3O95398 AC003669.1-201ENST00000334569 611 ntBASIC26.65■■□□□ 1.86
RAPGEF3O95398 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RAPGEF3O95398 EDF1-203ENST00000371649 790 ntTSL 2 BASIC26.65■■□□□ 1.86
RAPGEF3O95398 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
RAPGEF3O95398 CYB561-216ENST00000582297 897 ntTSL 3 BASIC26.65■■□□□ 1.86
RAPGEF3O95398 GGTLC5P-201ENST00000617623 998 ntBASIC26.65■■□□□ 1.86
RAPGEF3O95398 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RAPGEF3O95398 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC26.65■■□□□ 1.86
RAPGEF3O95398 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC26.65■■□□□ 1.86
RAPGEF3O95398 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
RAPGEF3O95398 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC26.65■■□□□ 1.86
RAPGEF3O95398 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RAPGEF3O95398 AC007952.6-201ENST00000573168 2673 ntBASIC26.64■■□□□ 1.86
RAPGEF3O95398 AC003957.1-201ENST00000625108 2673 ntBASIC26.64■■□□□ 1.86
RAPGEF3O95398 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RAPGEF3O95398 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RAPGEF3O95398 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC26.64■■□□□ 1.86
RAPGEF3O95398 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RAPGEF3O95398 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RAPGEF3O95398 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
RAPGEF3O95398 BASP1P1-201ENST00000430708 665 ntBASIC26.64■■□□□ 1.86
RAPGEF3O95398 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RAPGEF3O95398 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC26.64■■□□□ 1.86
RAPGEF3O95398 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RAPGEF3O95398 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC26.64■■□□□ 1.86
RAPGEF3O95398 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
RAPGEF3O95398 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms