Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC7.94□□□□□ -1.14
USH2AO75445 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC7.94□□□□□ -1.14
USH2AO75445 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC7.94□□□□□ -1.14
USH2AO75445 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
USH2AO75445 SPTLC1P1-201ENST00000447199 261 ntBASIC7.94□□□□□ -1.14
USH2AO75445 TIMM8BP1-201ENST00000452384 211 ntBASIC7.94□□□□□ -1.14
USH2AO75445 AC119751.2-201ENST00000504529 210 ntBASIC7.94□□□□□ -1.14
USH2AO75445 KRT8P23-201ENST00000560090 1207 ntBASIC7.94□□□□□ -1.14
USH2AO75445 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC7.94□□□□□ -1.14
USH2AO75445 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC7.93□□□□□ -1.14
USH2AO75445 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC7.93□□□□□ -1.14
USH2AO75445 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC7.93□□□□□ -1.14
USH2AO75445 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC7.93□□□□□ -1.14
USH2AO75445 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 CALY-202ENST00000368555 783 ntTSL 2 BASIC7.93□□□□□ -1.14
USH2AO75445 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC7.93□□□□□ -1.14
USH2AO75445 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC7.93□□□□□ -1.14
USH2AO75445 SRP19-202ENST00000445150 833 ntTSL 2 BASIC7.93□□□□□ -1.14
USH2AO75445 AC092658.1-201ENST00000505836 891 ntBASIC7.93□□□□□ -1.14
USH2AO75445 GPER1-207ENST00000619052 571 ntTSL 2 BASIC7.93□□□□□ -1.14
USH2AO75445 AC068587.9-201ENST00000641814 219 ntBASIC7.93□□□□□ -1.14
USH2AO75445 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC7.93□□□□□ -1.14
USH2AO75445 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC7.93□□□□□ -1.14
USH2AO75445 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC7.93□□□□□ -1.14
USH2AO75445 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC7.93□□□□□ -1.14
USH2AO75445 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC7.93□□□□□ -1.14
USH2AO75445 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 AL499627.1-201ENST00000569373 2188 ntBASIC7.93□□□□□ -1.14
USH2AO75445 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC7.93□□□□□ -1.14
USH2AO75445 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC7.93□□□□□ -1.14
USH2AO75445 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 AC099568.2-201ENST00000609194 695 ntBASIC7.93□□□□□ -1.14
USH2AO75445 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC7.93□□□□□ -1.14
USH2AO75445 FP475955.4-201ENST00000623131 1990 ntBASIC7.93□□□□□ -1.14
USH2AO75445 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 AC020907.5-201ENST00000624372 1936 ntBASIC7.93□□□□□ -1.14
USH2AO75445 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 AC125807.1-201ENST00000483097 614 ntBASIC7.93□□□□□ -1.14
USH2AO75445 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC7.93□□□□□ -1.14
USH2AO75445 LINC01225-203ENST00000563550 1244 ntBASIC7.93□□□□□ -1.14
USH2AO75445 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USH2AO75445 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC7.92□□□□□ -1.14
USH2AO75445 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC7.92□□□□□ -1.14
USH2AO75445 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC7.92□□□□□ -1.14
USH2AO75445 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 AC112191.1-201ENST00000523689 701 ntBASIC7.92□□□□□ -1.14
USH2AO75445 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
USH2AO75445 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC7.92□□□□□ -1.14
USH2AO75445 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms