Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRAF3IP2O43734 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16■□□□□ 0.15
TRAF3IP2O43734 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16■□□□□ 0.15
TRAF3IP2O43734 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16■□□□□ 0.15
TRAF3IP2O43734 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16■□□□□ 0.15
TRAF3IP2O43734 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16■□□□□ 0.15
TRAF3IP2O43734 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16■□□□□ 0.15
TRAF3IP2O43734 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRAF3IP2O43734 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
TRAF3IP2O43734 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAF3IP2O43734 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRAF3IP2O43734 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.99■□□□□ 0.15
TRAF3IP2O43734 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 AC006116.8-202ENST00000587620 1550 ntBASIC15.99■□□□□ 0.15
TRAF3IP2O43734 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 KRT8P47-201ENST00000604727 1398 ntBASIC15.99■□□□□ 0.15
TRAF3IP2O43734 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP2O43734 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 AC134043.2-201ENST00000624206 2238 ntBASIC15.98■□□□□ 0.15
TRAF3IP2O43734 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 GNAS-203ENST00000306120 1878 ntBASIC15.98■□□□□ 0.15
TRAF3IP2O43734 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.98■□□□□ 0.15
TRAF3IP2O43734 AC010331.1-201ENST00000611423 582 ntBASIC15.98■□□□□ 0.15
TRAF3IP2O43734 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAF3IP2O43734 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 AC005332.1-201ENST00000577698 1310 ntBASIC15.97■□□□□ 0.15
TRAF3IP2O43734 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms