Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LINC00602-201ENST00000629776 2065 ntBASIC17.03■□□□□ 0.32
UPK1AO00322 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
UPK1AO00322 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 PVRIG2P-201ENST00000435460 978 ntBASIC17.03■□□□□ 0.32
UPK1AO00322 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 AC034232.1-201ENST00000506026 1064 ntBASIC17.03■□□□□ 0.32
UPK1AO00322 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
UPK1AO00322 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
UPK1AO00322 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.03■□□□□ 0.32
UPK1AO00322 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.03■□□□□ 0.32
UPK1AO00322 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
UPK1AO00322 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
UPK1AO00322 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
UPK1AO00322 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.03■□□□□ 0.32
UPK1AO00322 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1AO00322 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1AO00322 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1AO00322 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.02■□□□□ 0.32
UPK1AO00322 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1AO00322 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.02■□□□□ 0.32
UPK1AO00322 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
UPK1AO00322 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1AO00322 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.02■□□□□ 0.32
UPK1AO00322 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
UPK1AO00322 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1AO00322 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1AO00322 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1AO00322 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1AO00322 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1AO00322 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
UPK1AO00322 AC117947.1-201ENST00000427448 529 ntBASIC17.02■□□□□ 0.32
UPK1AO00322 KRT18P57-201ENST00000443599 1254 ntBASIC17.02■□□□□ 0.32
UPK1AO00322 YBX1P2-201ENST00000489612 999 ntBASIC17.02■□□□□ 0.32
UPK1AO00322 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.02■□□□□ 0.32
UPK1AO00322 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
UPK1AO00322 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.02■□□□□ 0.32
UPK1AO00322 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1AO00322 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
UPK1AO00322 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
UPK1AO00322 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1AO00322 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1AO00322 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UPK1AO00322 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UPK1AO00322 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
UPK1AO00322 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.02■□□□□ 0.31
UPK1AO00322 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.02■□□□□ 0.31
UPK1AO00322 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
UPK1AO00322 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
UPK1AO00322 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 AC093010.1-201ENST00000473625 1624 ntBASIC17.01■□□□□ 0.31
UPK1AO00322 AL023806.1-201ENST00000603994 1649 ntBASIC17.01■□□□□ 0.31
UPK1AO00322 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
UPK1AO00322 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
UPK1AO00322 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 RASA4DP-201ENST00000460726 1199 ntBASIC17.01■□□□□ 0.31
UPK1AO00322 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.01■□□□□ 0.31
UPK1AO00322 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.01■□□□□ 0.31
UPK1AO00322 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.01■□□□□ 0.31
UPK1AO00322 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
UPK1AO00322 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
UPK1AO00322 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
UPK1AO00322 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.01■□□□□ 0.31
UPK1AO00322 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
UPK1AO00322 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
UPK1AO00322 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms