Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AP005901.3-202ENST00000581653 237 ntBASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.36■□□□□ 0.21
NPIPA2E9PIF3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 FDX1P1-201ENST00000449115 551 ntBASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 AL031008.1-201ENST00000619963 541 ntBASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA2E9PIF3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 TSPY12P-201ENST00000421279 868 ntBASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 AC079781.3-201ENST00000449110 356 ntBASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 AL353801.3-201ENST00000609898 542 ntBASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.34■□□□□ 0.21
NPIPA2E9PIF3 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.33■□□□□ 0.21
NPIPA2E9PIF3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
NPIPA2E9PIF3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPA2E9PIF3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPA2E9PIF3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.33■□□□□ 0.21
NPIPA2E9PIF3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.33■□□□□ 0.21
NPIPA2E9PIF3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPA2E9PIF3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NPIPA2E9PIF3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms