Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 AC130371.2-201ENST00000619443 611 ntBASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV18A0A075B6X5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 AP003097.1-201ENST00000530657 1135 ntBASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 AL031985.4-201ENST00000642138 673 ntBASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 AC133963.1-201ENST00000504166 1679 ntBASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRAV18A0A075B6X5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
TRAV18A0A075B6X5 LINC01126-201ENST00000623515 1646 ntBASIC15.46■□□□□ 0.06
TRAV18A0A075B6X5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV18A0A075B6X5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.46■□□□□ 0.06
TRAV18A0A075B6X5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV18A0A075B6X5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV18A0A075B6X5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.46■□□□□ 0.06
TRAV18A0A075B6X5 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 KRT16P1-201ENST00000399124 1418 ntBASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 AL353708.3-201ENST00000610272 989 ntBASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 AL109923.1-201ENST00000618799 583 ntBASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV18A0A075B6X5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV18A0A075B6X5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms