Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EBF1Q9UH73 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EBF1Q9UH73 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
EBF1Q9UH73 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.29■□□□□ 0.52
EBF1Q9UH73 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
EBF1Q9UH73 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EBF1Q9UH73 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EBF1Q9UH73 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EBF1Q9UH73 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.29■□□□□ 0.52
EBF1Q9UH73 MIR1233-2-201ENST00000408138 82 ntBASIC18.29■□□□□ 0.52
EBF1Q9UH73 MIR1233-1-201ENST00000408722 82 ntBASIC18.29■□□□□ 0.52
EBF1Q9UH73 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EBF1Q9UH73 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EBF1Q9UH73 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.29■□□□□ 0.52
EBF1Q9UH73 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.29■□□□□ 0.52
EBF1Q9UH73 POLD2P1-201ENST00000511220 997 ntBASIC18.29■□□□□ 0.52
EBF1Q9UH73 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.29■□□□□ 0.52
EBF1Q9UH73 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.29■□□□□ 0.52
EBF1Q9UH73 TERC-201ENST00000602385 541 ntBASIC18.29■□□□□ 0.52
EBF1Q9UH73 MIR7706-201ENST00000613747 67 ntBASIC18.29■□□□□ 0.52
EBF1Q9UH73 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.29■□□□□ 0.52
EBF1Q9UH73 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EBF1Q9UH73 FAM215A-202ENST00000632077 792 ntBASIC18.29■□□□□ 0.52
EBF1Q9UH73 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
EBF1Q9UH73 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EBF1Q9UH73 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EBF1Q9UH73 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.29■□□□□ 0.52
EBF1Q9UH73 AC112777.1-201ENST00000540175 1423 ntBASIC18.29■□□□□ 0.52
EBF1Q9UH73 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EBF1Q9UH73 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
EBF1Q9UH73 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.29■□□□□ 0.52
EBF1Q9UH73 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
EBF1Q9UH73 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF1Q9UH73 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF1Q9UH73 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EBF1Q9UH73 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EBF1Q9UH73 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EBF1Q9UH73 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EBF1Q9UH73 AC009113.1-201ENST00000570267 2443 ntBASIC18.28■□□□□ 0.52
EBF1Q9UH73 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF1Q9UH73 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.28■□□□□ 0.52
EBF1Q9UH73 AC068472.1-201ENST00000474589 881 ntBASIC18.28■□□□□ 0.52
EBF1Q9UH73 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.28■□□□□ 0.52
EBF1Q9UH73 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.28■□□□□ 0.52
EBF1Q9UH73 AC009533.2-201ENST00000543664 586 ntBASIC18.28■□□□□ 0.52
EBF1Q9UH73 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.28■□□□□ 0.52
EBF1Q9UH73 AC005336.2-201ENST00000593183 939 ntBASIC18.28■□□□□ 0.52
EBF1Q9UH73 AC083906.6-201ENST00000641366 219 ntBASIC18.28■□□□□ 0.52
EBF1Q9UH73 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF1Q9UH73 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF1Q9UH73 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF1Q9UH73 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
EBF1Q9UH73 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.28■□□□□ 0.52
EBF1Q9UH73 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF1Q9UH73 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF1Q9UH73 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF1Q9UH73 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EBF1Q9UH73 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EBF1Q9UH73 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.27■□□□□ 0.52
EBF1Q9UH73 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.27■□□□□ 0.52
EBF1Q9UH73 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
EBF1Q9UH73 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EBF1Q9UH73 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.27■□□□□ 0.52
EBF1Q9UH73 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EBF1Q9UH73 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
EBF1Q9UH73 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EBF1Q9UH73 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
EBF1Q9UH73 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.27■□□□□ 0.52
EBF1Q9UH73 MTDHP3-201ENST00000594186 672 ntBASIC18.27■□□□□ 0.52
EBF1Q9UH73 AL049840.3-201ENST00000602669 611 ntBASIC18.27■□□□□ 0.52
EBF1Q9UH73 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.27■□□□□ 0.52
EBF1Q9UH73 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EBF1Q9UH73 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EBF1Q9UH73 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EBF1Q9UH73 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.27■□□□□ 0.51
EBF1Q9UH73 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EBF1Q9UH73 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EBF1Q9UH73 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EBF1Q9UH73 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EBF1Q9UH73 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
EBF1Q9UH73 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
EBF1Q9UH73 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
EBF1Q9UH73 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
EBF1Q9UH73 AC009102.3-201ENST00000623118 1491 ntBASIC18.26■□□□□ 0.51
EBF1Q9UH73 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EBF1Q9UH73 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
EBF1Q9UH73 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.26■□□□□ 0.51
EBF1Q9UH73 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EBF1Q9UH73 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EBF1Q9UH73 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EBF1Q9UH73 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
EBF1Q9UH73 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.26■□□□□ 0.51
EBF1Q9UH73 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EBF1Q9UH73 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.26■□□□□ 0.51
EBF1Q9UH73 BX842568.4-201ENST00000421222 227 ntBASIC18.26■□□□□ 0.51
EBF1Q9UH73 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.26■□□□□ 0.51
EBF1Q9UH73 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.26■□□□□ 0.51
EBF1Q9UH73 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.26■□□□□ 0.51
EBF1Q9UH73 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
EBF1Q9UH73 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms