Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 NPAP1P7-201ENST00000613027 823 ntBASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.98■□□□□ 0.31
PRDM9Q9NQV7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 KRT18P1-202ENST00000452408 1331 ntBASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 AP002383.4-201ENST00000442518 975 ntBASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 AC098799.1-201ENST00000504752 800 ntBASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 AL592071.1-201ENST00000611956 408 ntBASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 AC116407.2-201ENST00000613639 860 ntBASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRDM9Q9NQV7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 RN7SL606P-201ENST00000472779 293 ntBASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 RN7SL602P-201ENST00000578326 324 ntBASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 AP002414.4-201ENST00000589764 1148 ntBASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 AC124864.1-201ENST00000623408 392 ntBASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRDM9Q9NQV7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms