Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BARD1Q99728 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.22■□□□□ 0.35
BARD1Q99728 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
BARD1Q99728 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
BARD1Q99728 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
BARD1Q99728 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BARD1Q99728 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BARD1Q99728 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.22■□□□□ 0.35
BARD1Q99728 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
BARD1Q99728 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.22■□□□□ 0.35
BARD1Q99728 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BARD1Q99728 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.22■□□□□ 0.35
BARD1Q99728 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BARD1Q99728 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BARD1Q99728 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.22■□□□□ 0.35
BARD1Q99728 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
BARD1Q99728 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.22■□□□□ 0.35
BARD1Q99728 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.22■□□□□ 0.35
BARD1Q99728 MIR4674-201ENST00000582457 87 ntBASIC17.22■□□□□ 0.35
BARD1Q99728 REXO1L9P-201ENST00000604264 2108 ntBASIC17.22■□□□□ 0.35
BARD1Q99728 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BARD1Q99728 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BARD1Q99728 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BARD1Q99728 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
BARD1Q99728 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BARD1Q99728 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BARD1Q99728 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
BARD1Q99728 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BARD1Q99728 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BARD1Q99728 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
BARD1Q99728 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
BARD1Q99728 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BARD1Q99728 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
BARD1Q99728 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BARD1Q99728 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
BARD1Q99728 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.21■□□□□ 0.35
BARD1Q99728 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.21■□□□□ 0.35
BARD1Q99728 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
BARD1Q99728 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BARD1Q99728 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.21■□□□□ 0.35
BARD1Q99728 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BARD1Q99728 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
BARD1Q99728 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.21■□□□□ 0.35
BARD1Q99728 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BARD1Q99728 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BARD1Q99728 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BARD1Q99728 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BARD1Q99728 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.21■□□□□ 0.35
BARD1Q99728 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BARD1Q99728 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
BARD1Q99728 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.21■□□□□ 0.35
BARD1Q99728 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BARD1Q99728 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.21■□□□□ 0.35
BARD1Q99728 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
BARD1Q99728 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
BARD1Q99728 AC012313.10-201ENST00000623509 926 ntBASIC17.21■□□□□ 0.35
BARD1Q99728 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.21■□□□□ 0.35
BARD1Q99728 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.21■□□□□ 0.35
BARD1Q99728 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.21■□□□□ 0.35
BARD1Q99728 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.21■□□□□ 0.35
BARD1Q99728 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.21■□□□□ 0.35
BARD1Q99728 AC138028.4-201ENST00000564984 1845 ntBASIC17.21■□□□□ 0.35
BARD1Q99728 AL357033.4-201ENST00000617703 1807 ntBASIC17.21■□□□□ 0.35
BARD1Q99728 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BARD1Q99728 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
BARD1Q99728 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
BARD1Q99728 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
BARD1Q99728 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.21■□□□□ 0.34
BARD1Q99728 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.21■□□□□ 0.34
BARD1Q99728 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
BARD1Q99728 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
BARD1Q99728 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.21■□□□□ 0.34
BARD1Q99728 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
BARD1Q99728 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
BARD1Q99728 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.2■□□□□ 0.34
BARD1Q99728 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BARD1Q99728 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BARD1Q99728 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.2■□□□□ 0.34
BARD1Q99728 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BARD1Q99728 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BARD1Q99728 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BARD1Q99728 KRT8P32-201ENST00000512863 1461 ntBASIC17.2■□□□□ 0.34
BARD1Q99728 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.2■□□□□ 0.34
BARD1Q99728 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BARD1Q99728 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BARD1Q99728 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BARD1Q99728 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.2■□□□□ 0.34
BARD1Q99728 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.2■□□□□ 0.34
BARD1Q99728 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BARD1Q99728 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
BARD1Q99728 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.2■□□□□ 0.34
BARD1Q99728 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BARD1Q99728 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.2■□□□□ 0.34
BARD1Q99728 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.2■□□□□ 0.34
BARD1Q99728 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
BARD1Q99728 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
BARD1Q99728 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
BARD1Q99728 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.2■□□□□ 0.34
BARD1Q99728 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BARD1Q99728 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms