Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 AC022145.2-201ENST00000598203 171 ntBASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CSMD1Q96PZ7 TSPY16P-201ENST00000449843 468 ntBASIC15.21■□□□□ 0.02
CSMD1Q96PZ7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
CSMD1Q96PZ7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CSMD1Q96PZ7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.21■□□□□ 0.02
CSMD1Q96PZ7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CSMD1Q96PZ7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CSMD1Q96PZ7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
CSMD1Q96PZ7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.21■□□□□ 0.02
CSMD1Q96PZ7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CSMD1Q96PZ7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.21■□□□□ 0.02
CSMD1Q96PZ7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 NME2P1-201ENST00000426182 414 ntBASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 INGX-202ENST00000489074 768 ntBASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 AC148477.5-201ENST00000625164 1645 ntBASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 AL499627.1-201ENST00000569373 2188 ntBASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 AL163051.1-201ENST00000569214 1512 ntBASIC15.2■□□□□ 0.02
CSMD1Q96PZ7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 AC008761.3-201ENST00000624803 892 ntBASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 KRT8P32-201ENST00000512863 1461 ntBASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms