Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFAP54Q96N23 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFAP54Q96N23 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFAP54Q96N23 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 ADH5P3-201ENST00000433842 1137 ntBASIC17.51■□□□□ 0.39
CFAP54Q96N23 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CFAP54Q96N23 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 SPTSSB-204ENST00000617024 1292 ntBASIC17.51■□□□□ 0.39
CFAP54Q96N23 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CFAP54Q96N23 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFAP54Q96N23 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFAP54Q96N23 AC079776.2-201ENST00000641154 1609 ntBASIC17.51■□□□□ 0.39
CFAP54Q96N23 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CFAP54Q96N23 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFAP54Q96N23 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFAP54Q96N23 IGLL3P-201ENST00000412472 434 ntBASIC17.51■□□□□ 0.39
CFAP54Q96N23 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 AC068472.1-201ENST00000474589 881 ntBASIC17.51■□□□□ 0.39
CFAP54Q96N23 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 MIR6805-201ENST00000615055 62 ntBASIC17.51■□□□□ 0.39
CFAP54Q96N23 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.51■□□□□ 0.39
CFAP54Q96N23 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CFAP54Q96N23 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.5■□□□□ 0.39
CFAP54Q96N23 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CFAP54Q96N23 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CFAP54Q96N23 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CFAP54Q96N23 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.5■□□□□ 0.39
CFAP54Q96N23 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.5■□□□□ 0.39
CFAP54Q96N23 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CFAP54Q96N23 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CFAP54Q96N23 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CFAP54Q96N23 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.5■□□□□ 0.39
CFAP54Q96N23 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CFAP54Q96N23 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CFAP54Q96N23 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CFAP54Q96N23 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CFAP54Q96N23 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CFAP54Q96N23 AL032819.2-201ENST00000624543 2162 ntBASIC17.5■□□□□ 0.39
CFAP54Q96N23 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.5■□□□□ 0.39
CFAP54Q96N23 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.5■□□□□ 0.39
CFAP54Q96N23 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.5■□□□□ 0.39
CFAP54Q96N23 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.5■□□□□ 0.39
CFAP54Q96N23 MIR943-201ENST00000401286 94 ntBASIC17.5■□□□□ 0.39
CFAP54Q96N23 AC113404.2-201ENST00000507884 177 ntBASIC17.5■□□□□ 0.39
CFAP54Q96N23 SERBP1P5-201ENST00000510079 1181 ntBASIC17.5■□□□□ 0.39
CFAP54Q96N23 AL589182.2-201ENST00000619332 1049 ntBASIC17.5■□□□□ 0.39
CFAP54Q96N23 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CFAP54Q96N23 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CFAP54Q96N23 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.5■□□□□ 0.39
CFAP54Q96N23 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CFAP54Q96N23 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP54Q96N23 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP54Q96N23 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.49■□□□□ 0.39
CFAP54Q96N23 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP54Q96N23 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP54Q96N23 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP54Q96N23 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP54Q96N23 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP54Q96N23 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP54Q96N23 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 GPR53P-205ENST00000457298 1084 ntBASIC17.49■□□□□ 0.39
CFAP54Q96N23 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 MIR4525-201ENST00000580000 75 ntBASIC17.49■□□□□ 0.39
CFAP54Q96N23 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP54Q96N23 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP54Q96N23 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP54Q96N23 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP54Q96N23 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.49■□□□□ 0.39
CFAP54Q96N23 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP54Q96N23 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP54Q96N23 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP54Q96N23 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.48■□□□□ 0.39
CFAP54Q96N23 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP54Q96N23 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP54Q96N23 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms