Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SIPA1Q96FS4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SIPA1Q96FS4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.98■□□□□ 0.47
SIPA1Q96FS4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIPA1Q96FS4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SIPA1Q96FS4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 AL031598.1-201ENST00000561511 1773 ntBASIC17.97■□□□□ 0.47
SIPA1Q96FS4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 ZNF259P1-201ENST00000407656 1365 ntBASIC17.97■□□□□ 0.47
SIPA1Q96FS4 AC087289.5-201ENST00000586076 3175 ntBASIC17.97■□□□□ 0.47
SIPA1Q96FS4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 RPS2P1-201ENST00000434010 821 ntBASIC17.97■□□□□ 0.47
SIPA1Q96FS4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 AC097374.2-201ENST00000618617 1306 ntBASIC17.97■□□□□ 0.47
SIPA1Q96FS4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIPA1Q96FS4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 AL139288.1-201ENST00000623748 933 ntBASIC17.96■□□□□ 0.47
SIPA1Q96FS4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIPA1Q96FS4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SIPA1Q96FS4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
SIPA1Q96FS4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 AC026471.1-201ENST00000564629 3026 ntBASIC17.95■□□□□ 0.46
SIPA1Q96FS4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 AC007967.3-201ENST00000434308 558 ntBASIC17.95■□□□□ 0.46
SIPA1Q96FS4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 OR7E14P-202ENST00000530490 1290 ntBASIC17.95■□□□□ 0.46
SIPA1Q96FS4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms