Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 KRT18P31-201ENST00000506277 1292 ntBASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 AL450487.1-201ENST00000426799 995 ntBASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 KRT16P4-201ENST00000453883 522 ntBASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 AC096582.2-201ENST00000510860 516 ntBASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 NEFHP1-201ENST00000412845 2629 ntBASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.93■□□□□ 0.46
ECHDC3Q96DC8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 RCN1P2-201ENST00000398357 915 ntBASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 AC007967.3-201ENST00000434308 558 ntBASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 AL732292.2-201ENST00000609649 430 ntBASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 INTS4P1-201ENST00000438455 1935 ntBASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.92■□□□□ 0.46
ECHDC3Q96DC8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms