Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 AC098590.1-201ENST00000468126 897 ntBASIC17.29■□□□□ 0.36
VPS33AQ96AX1 AP003041.3-201ENST00000527151 707 ntBASIC17.29■□□□□ 0.36
VPS33AQ96AX1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS33AQ96AX1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 AC022211.2-201ENST00000585075 2527 ntBASIC17.28■□□□□ 0.36
VPS33AQ96AX1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 OR6D1P-203ENST00000641209 4860 ntBASIC17.28■□□□□ 0.36
VPS33AQ96AX1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 KRT18P29-201ENST00000397031 1267 ntBASIC17.28■□□□□ 0.36
VPS33AQ96AX1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 FAM201B-201ENST00000458407 597 ntBASIC17.28■□□□□ 0.36
VPS33AQ96AX1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 CR769767.2-201ENST00000622735 460 ntBASIC17.28■□□□□ 0.36
VPS33AQ96AX1 AC113410.3-201ENST00000623366 203 ntBASIC17.28■□□□□ 0.36
VPS33AQ96AX1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 KRT8P7-201ENST00000533003 1432 ntBASIC17.28■□□□□ 0.36
VPS33AQ96AX1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 AC100803.2-201ENST00000562459 1963 ntBASIC17.28■□□□□ 0.36
VPS33AQ96AX1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS33AQ96AX1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 ABHD17AP1-201ENST00000358206 933 ntBASIC17.27■□□□□ 0.36
VPS33AQ96AX1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 RPS2P55-201ENST00000397318 883 ntBASIC17.27■□□□□ 0.36
VPS33AQ96AX1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 AC107956.1-201ENST00000494359 873 ntBASIC17.27■□□□□ 0.36
VPS33AQ96AX1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS33AQ96AX1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
VPS33AQ96AX1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
VPS33AQ96AX1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VPS33AQ96AX1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VPS33AQ96AX1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
VPS33AQ96AX1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VPS33AQ96AX1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
VPS33AQ96AX1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VPS33AQ96AX1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.27■□□□□ 0.35
VPS33AQ96AX1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS33AQ96AX1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms