Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RDH11Q8TC12 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RDH11Q8TC12 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RDH11Q8TC12 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RDH11Q8TC12 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RDH11Q8TC12 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RDH11Q8TC12 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.7■□□□□ 0.42
RDH11Q8TC12 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RDH11Q8TC12 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RDH11Q8TC12 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
RDH11Q8TC12 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.69■□□□□ 0.42
RDH11Q8TC12 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RDH11Q8TC12 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.69■□□□□ 0.42
RDH11Q8TC12 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.69■□□□□ 0.42
RDH11Q8TC12 C2orf69P3-201ENST00000565542 1120 ntBASIC17.69■□□□□ 0.42
RDH11Q8TC12 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 LINC01451-201ENST00000623792 534 ntBASIC17.69■□□□□ 0.42
RDH11Q8TC12 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.69■□□□□ 0.42
RDH11Q8TC12 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 AD000864.1-201ENST00000624076 2295 ntBASIC17.69■□□□□ 0.42
RDH11Q8TC12 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RDH11Q8TC12 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
RDH11Q8TC12 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RDH11Q8TC12 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RDH11Q8TC12 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.68■□□□□ 0.42
RDH11Q8TC12 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.68■□□□□ 0.42
RDH11Q8TC12 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.68■□□□□ 0.42
RDH11Q8TC12 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.68■□□□□ 0.42
RDH11Q8TC12 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.68■□□□□ 0.42
RDH11Q8TC12 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.68■□□□□ 0.42
RDH11Q8TC12 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.68■□□□□ 0.42
RDH11Q8TC12 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.68■□□□□ 0.42
RDH11Q8TC12 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.68■□□□□ 0.42
RDH11Q8TC12 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.68■□□□□ 0.42
RDH11Q8TC12 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.68■□□□□ 0.42
RDH11Q8TC12 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.68■□□□□ 0.42
RDH11Q8TC12 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RDH11Q8TC12 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 PCDHA12-202ENST00000613593 2588 ntBASIC17.68■□□□□ 0.42
RDH11Q8TC12 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RDH11Q8TC12 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RDH11Q8TC12 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RDH11Q8TC12 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.67■□□□□ 0.42
RDH11Q8TC12 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RDH11Q8TC12 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.67■□□□□ 0.42
RDH11Q8TC12 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RDH11Q8TC12 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RDH11Q8TC12 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RDH11Q8TC12 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.67■□□□□ 0.42
RDH11Q8TC12 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.67■□□□□ 0.42
RDH11Q8TC12 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RDH11Q8TC12 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.67■□□□□ 0.42
RDH11Q8TC12 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RDH11Q8TC12 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
RDH11Q8TC12 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RDH11Q8TC12 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RDH11Q8TC12 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RDH11Q8TC12 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RDH11Q8TC12 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.67■□□□□ 0.42
RDH11Q8TC12 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RDH11Q8TC12 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RDH11Q8TC12 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RDH11Q8TC12 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RDH11Q8TC12 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.67■□□□□ 0.42
RDH11Q8TC12 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RDH11Q8TC12 CROCCP2-202ENST00000412962 2773 ntBASIC17.67■□□□□ 0.42
RDH11Q8TC12 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RDH11Q8TC12 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms