Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 NCF1C-201ENST00000438382 1427 ntBASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 HTR5BP-201ENST00000430851 1154 ntBASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 MKNK2P1-201ENST00000437526 628 ntBASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 RPS15P9-201ENST00000494093 319 ntBASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHDC9Q8NEP7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 MIR4751-201ENST00000578027 74 ntBASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 AC004790.2-201ENST00000623588 572 ntBASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 PHGDH-209ENST00000641074 1780 ntBASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHDC9Q8NEP7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 CNN2P11-201ENST00000429351 262 ntBASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 AC116562.4-201ENST00000641316 2276 ntBASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.69■□□□□ 0.74
KLHDC9Q8NEP7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 ELL2P1-201ENST00000413990 1906 ntBASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
KLHDC9Q8NEP7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.67■□□□□ 0.74
KLHDC9Q8NEP7 GPR89P-201ENST00000407924 1495 ntBASIC19.67■□□□□ 0.74
KLHDC9Q8NEP7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
KLHDC9Q8NEP7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHDC9Q8NEP7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KLHDC9Q8NEP7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHDC9Q8NEP7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHDC9Q8NEP7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KLHDC9Q8NEP7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHDC9Q8NEP7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms