Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC38A9Q8NBW4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SLC38A9Q8NBW4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SLC38A9Q8NBW4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 TNXA-203ENST00000507684 2038 ntBASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 AL020996.1-203ENST00000536896 2307 ntBASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 AL096828.2-201ENST00000567259 1965 ntBASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 IL9RP2-201ENST00000423948 1312 ntBASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 AC097374.2-201ENST00000618617 1306 ntBASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 KRT8P47-201ENST00000604727 1398 ntBASIC16.89■□□□□ 0.29
SLC38A9Q8NBW4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 SART3-203ENST00000546611 1184 ntBASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 AL671883.3-201ENST00000603274 991 ntBASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 AC010460.3-201ENST00000511359 1579 ntBASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 AC093677.2-201ENST00000600169 1863 ntBASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 AC135776.1-201ENST00000319817 2481 ntBASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC38A9Q8NBW4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A9Q8NBW4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms