Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
UBR1Q8IWV7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
UBR1Q8IWV7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
UBR1Q8IWV7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
UBR1Q8IWV7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC25.35■■□□□ 1.65
UBR1Q8IWV7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC25.35■■□□□ 1.65
UBR1Q8IWV7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
UBR1Q8IWV7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC25.34■■□□□ 1.65
UBR1Q8IWV7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC25.34■■□□□ 1.65
UBR1Q8IWV7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC25.34■■□□□ 1.65
UBR1Q8IWV7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
UBR1Q8IWV7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
UBR1Q8IWV7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
UBR1Q8IWV7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC25.34■■□□□ 1.65
UBR1Q8IWV7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
UBR1Q8IWV7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
UBR1Q8IWV7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
UBR1Q8IWV7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC25.34■■□□□ 1.65
UBR1Q8IWV7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC25.34■■□□□ 1.65
UBR1Q8IWV7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
UBR1Q8IWV7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC25.34■■□□□ 1.65
UBR1Q8IWV7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC25.34■■□□□ 1.65
UBR1Q8IWV7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
UBR1Q8IWV7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
UBR1Q8IWV7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
UBR1Q8IWV7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
UBR1Q8IWV7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
UBR1Q8IWV7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
UBR1Q8IWV7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
UBR1Q8IWV7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC25.33■■□□□ 1.65
UBR1Q8IWV7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC25.33■■□□□ 1.65
UBR1Q8IWV7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC25.33■■□□□ 1.65
UBR1Q8IWV7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
UBR1Q8IWV7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC25.33■■□□□ 1.65
UBR1Q8IWV7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
UBR1Q8IWV7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC25.33■■□□□ 1.65
UBR1Q8IWV7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
UBR1Q8IWV7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
UBR1Q8IWV7 AC025580.3-201ENST00000617932 1424 ntBASIC25.33■■□□□ 1.65
UBR1Q8IWV7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
UBR1Q8IWV7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 COPE-202ENST00000349893 948 ntTSL 2 BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 AC004835.2-201ENST00000603762 682 ntBASIC25.32■■□□□ 1.64
UBR1Q8IWV7 MED16-214ENST00000617672 554 ntTSL 5 BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 COX5BP2-201ENST00000392354 334 ntBASIC25.32■■□□□ 1.64
UBR1Q8IWV7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 AC093520.2-201ENST00000561830 333 ntBASIC25.32■■□□□ 1.64
UBR1Q8IWV7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
UBR1Q8IWV7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
UBR1Q8IWV7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
UBR1Q8IWV7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC25.31■■□□□ 1.64
UBR1Q8IWV7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
UBR1Q8IWV7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
UBR1Q8IWV7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
UBR1Q8IWV7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC25.31■■□□□ 1.64
UBR1Q8IWV7 AC092919.2-201ENST00000623631 1645 ntBASIC25.31■■□□□ 1.64
UBR1Q8IWV7 AC074386.1-202ENST00000463561 864 ntBASIC25.31■■□□□ 1.64
UBR1Q8IWV7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC25.31■■□□□ 1.64
UBR1Q8IWV7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC25.31■■□□□ 1.64
UBR1Q8IWV7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC25.31■■□□□ 1.64
UBR1Q8IWV7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
UBR1Q8IWV7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC25.31■■□□□ 1.64
UBR1Q8IWV7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC25.31■■□□□ 1.64
UBR1Q8IWV7 AC015911.4-201ENST00000588022 1070 ntBASIC25.31■■□□□ 1.64
UBR1Q8IWV7 GGTLC5P-201ENST00000617623 998 ntBASIC25.31■■□□□ 1.64
UBR1Q8IWV7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC25.31■■□□□ 1.64
UBR1Q8IWV7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
UBR1Q8IWV7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
UBR1Q8IWV7 AC006116.8-202ENST00000587620 1550 ntBASIC25.3■■□□□ 1.64
UBR1Q8IWV7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
UBR1Q8IWV7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
UBR1Q8IWV7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
UBR1Q8IWV7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
UBR1Q8IWV7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC25.3■■□□□ 1.64
UBR1Q8IWV7 AC244107.1-201ENST00000442033 332 ntBASIC25.3■■□□□ 1.64
UBR1Q8IWV7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC25.3■■□□□ 1.64
UBR1Q8IWV7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC25.3■■□□□ 1.64
UBR1Q8IWV7 TK1-204ENST00000590430 683 ntTSL 3 BASIC25.3■■□□□ 1.64
UBR1Q8IWV7 AC023141.13-201ENST00000604991 943 ntBASIC25.3■■□□□ 1.64
UBR1Q8IWV7 AL353135.1-201ENST00000606729 504 ntBASIC25.3■■□□□ 1.64
UBR1Q8IWV7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
UBR1Q8IWV7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC25.3■■□□□ 1.64
UBR1Q8IWV7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
UBR1Q8IWV7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
UBR1Q8IWV7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
UBR1Q8IWV7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms