Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 AC012306.2-201ENST00000609350 630 ntBASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 AC097493.4-201ENST00000641197 219 ntBASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 AL391807.1-203ENST00000604392 2365 ntBASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 PKD1P1-201ENST00000458669 6805 ntBASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL3Q8IVW4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 TERF1P1-201ENST00000311003 1181 ntBASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 BX664615.1-201ENST00000443558 458 ntBASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 AC079602.3-201ENST00000623931 403 ntBASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKL3Q8IVW4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 SPDYE15P-201ENST00000424157 909 ntBASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 KRT18P65-201ENST00000439811 1286 ntBASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.46■□□□□ 0.55
CDKL3Q8IVW4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
CDKL3Q8IVW4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKL3Q8IVW4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKL3Q8IVW4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL3Q8IVW4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL3Q8IVW4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKL3Q8IVW4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL3Q8IVW4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.45■□□□□ 0.54
CDKL3Q8IVW4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL3Q8IVW4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL3Q8IVW4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms