Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 SLC25A3P1-201ENST00000443844 931 ntBASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC00346Q8IVM7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 AC010203.1-204ENST00000548782 407 ntBASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 KRT18P55-202ENST00000578578 1546 ntBASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 AC100803.2-201ENST00000562459 1963 ntBASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.93■□□□□ 0.14
LINC00346Q8IVM7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 AC006116.8-202ENST00000587620 1550 ntBASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 LIN28AP1-201ENST00000429574 405 ntBASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 ATP5G1P1-201ENST00000448724 379 ntBASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 AL138966.2-201ENST00000621997 464 ntBASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 AC133561.5-201ENST00000635547 218 ntBASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms