Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 AC024563.2-201ENST00000603282 481 ntBASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NHLRC1Q6VVB1 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.14■□□□□ 0.18
NHLRC1Q6VVB1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
NHLRC1Q6VVB1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 DUX4L26-201ENST00000489078 1255 ntBASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 AC008687.5-201ENST00000593746 558 ntBASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NHLRC1Q6VVB1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NHLRC1Q6VVB1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NHLRC1Q6VVB1 TNRC18P3-201ENST00000441896 2691 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms